==2419517== Memcheck, a memory error detector ==2419517== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2419517== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2419517== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==2419517== Parent PID: 2403132 ==2419517== ==2419517== ==2419517== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2419517== Open file descriptor 12: ==2419517== at 0xBD5522D: pipe (pipe.c:29) ==2419517== by 0x13F9607D: ??? ==2419517== by 0xF74B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2419517== by 0xB643418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419517== by 0xB5DCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419517== by 0xA2D3D38: PetscInitialize (pinit.c:924) ==2419517== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2419517== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2419517== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2419517== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2419517== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2419517== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2419517== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2419517== by 0x138285: main (TestBidomainProblem.cpp:19) ==2419517== ==2419517== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2419517== at 0xBD59BCC: __open_nocancel (open64_nocancel.c:39) ==2419517== by 0xBCDDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2419517== by 0xA17B822: ??? ==2419517== by 0xA17B96F: ??? ==2419517== by 0xF7F06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2419517== by 0xF7F0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2419517== by 0xF7A6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2419517== by 0xF74B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2419517== by 0xB643418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419517== by 0xB5DCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419517== by 0xA2D3D38: PetscInitialize (pinit.c:924) ==2419517== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2419517== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2419517== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2419517== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2419517== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2419517== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2419517== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2419517== by 0x138285: main (TestBidomainProblem.cpp:19) ==2419517== ==2419517== Open file descriptor 116: ==2419517== ==2419517== ==2419517== Open file descriptor 112: ==2419517== ==2419517== ==2419517== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==2419517== ==2419517== ==2419517== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2419517== ==2419517== ==2419517== ==2419517== HEAP SUMMARY: ==2419517== in use at exit: 701,223 bytes in 9,387 blocks ==2419517== total heap usage: 588,768 allocs, 579,381 frees, 1,564,810,352 bytes allocated ==2419517== ==2419517== LEAK SUMMARY: ==2419517== definitely lost: 0 bytes in 0 blocks ==2419517== indirectly lost: 0 bytes in 0 blocks ==2419517== possibly lost: 0 bytes in 0 blocks ==2419517== still reachable: 24 bytes in 2 blocks ==2419517== suppressed: 701,199 bytes in 9,385 blocks ==2419517== Reachable blocks (those to which a pointer was found) are not shown. ==2419517== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2419517== ==2419517== For lists of detected and suppressed errors, rerun with: -s ==2419517== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)