==2419568== Memcheck, a memory error detector ==2419568== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2419568== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2419568== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==2419568== Parent PID: 2403132 ==2419568== ==2419568== ==2419568== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2419568== Open file descriptor 12: ==2419568== at 0xA85C22D: pipe (pipe.c:29) ==2419568== by 0x13F9607D: ??? ==2419568== by 0xF7984CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2419568== by 0xBF56418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419568== by 0xBEEFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419568== by 0xABE6D38: PetscInitialize (pinit.c:924) ==2419568== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2419568== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2419568== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2419568== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2419568== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2419568== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2419568== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2419568== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==2419568== ==2419568== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2419568== at 0xA860BCC: __open_nocancel (open64_nocancel.c:39) ==2419568== by 0xA7E4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2419568== by 0xA17B822: ??? ==2419568== by 0xA17B96F: ??? ==2419568== by 0xF83D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2419568== by 0xF83D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2419568== by 0xF7F3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2419568== by 0xF7982DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2419568== by 0xBF56418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419568== by 0xBEEFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2419568== by 0xABE6D38: PetscInitialize (pinit.c:924) ==2419568== by 0xA147153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2419568== by 0xA1471A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2419568== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2419568== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2419568== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2419568== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2419568== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2419568== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==2419568== ==2419568== Open file descriptor 116: ==2419568== ==2419568== ==2419568== Open file descriptor 112: ==2419568== ==2419568== ==2419568== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==2419568== ==2419568== ==2419568== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2419568== ==2419568== ==2419568== ==2419568== HEAP SUMMARY: ==2419568== in use at exit: 701,223 bytes in 9,387 blocks ==2419568== total heap usage: 468,293 allocs, 458,906 frees, 1,461,227,947 bytes allocated ==2419568== ==2419568== LEAK SUMMARY: ==2419568== definitely lost: 0 bytes in 0 blocks ==2419568== indirectly lost: 0 bytes in 0 blocks ==2419568== possibly lost: 0 bytes in 0 blocks ==2419568== still reachable: 24 bytes in 2 blocks ==2419568== suppressed: 701,199 bytes in 9,385 blocks ==2419568== Reachable blocks (those to which a pointer was found) are not shown. ==2419568== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2419568== ==2419568== For lists of detected and suppressed errors, rerun with: -s ==2419568== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)