==2474015== Memcheck, a memory error detector ==2474015== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2474015== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2474015== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2474015== Parent PID: 2459259 ==2474015== ==2474015== ==2474015== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2474015== Open file descriptor 12: ==2474015== at 0xEC9322D: pipe (pipe.c:29) ==2474015== by 0x18A1F07D: ??? ==2474015== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2474015== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2474015== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2474015== by 0xF57FD38: PetscInitialize (pinit.c:924) ==2474015== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2474015== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2474015== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2474015== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2474015== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2474015== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2474015== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2474015== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==2474015== ==2474015== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2474015== at 0xEC97BCC: __open_nocancel (open64_nocancel.c:39) ==2474015== by 0xEC1BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2474015== by 0xE4A3822: ??? ==2474015== by 0xE4A396F: ??? ==2474015== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2474015== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2474015== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2474015== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2474015== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2474015== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2474015== by 0xF57FD38: PetscInitialize (pinit.c:924) ==2474015== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2474015== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2474015== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2474015== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2474015== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2474015== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2474015== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2474015== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==2474015== ==2474015== Open file descriptor 116: ==2474015== ==2474015== ==2474015== Open file descriptor 112: ==2474015== ==2474015== ==2474015== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==2474015== ==2474015== ==2474015== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2474015== ==2474015== ==2474015== ==2474015== HEAP SUMMARY: ==2474015== in use at exit: 700,704 bytes in 9,375 blocks ==2474015== total heap usage: 11,683,886 allocs, 11,674,511 frees, 2,223,630,619 bytes allocated ==2474015== ==2474015== LEAK SUMMARY: ==2474015== definitely lost: 0 bytes in 0 blocks ==2474015== indirectly lost: 0 bytes in 0 blocks ==2474015== possibly lost: 0 bytes in 0 blocks ==2474015== still reachable: 72 bytes in 4 blocks ==2474015== suppressed: 700,632 bytes in 9,371 blocks ==2474015== Reachable blocks (those to which a pointer was found) are not shown. ==2474015== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2474015== ==2474015== For lists of detected and suppressed errors, rerun with: -s ==2474015== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)