==2516523== Memcheck, a memory error detector ==2516523== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2516523== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2516523== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==2516523== Parent PID: 2515385 ==2516523== ==2516523== ==2516523== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2516523== Open file descriptor 12: ==2516523== at 0xE40F22D: pipe (pipe.c:29) ==2516523== by 0x18A2007D: ??? ==2516523== by 0x12F6F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2516523== by 0xE05E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516523== by 0xDFF7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516523== by 0xCCCED38: PetscInitialize (pinit.c:924) ==2516523== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2516523== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2516523== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2516523== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2516523== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2516523== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2516523== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2516523== by 0x113935: main (TestCellSrn.cpp:18) ==2516523== ==2516523== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2516523== at 0xE413BCC: __open_nocancel (open64_nocancel.c:39) ==2516523== by 0xE397C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2516523== by 0xDF58822: ??? ==2516523== by 0xDF5896F: ??? ==2516523== by 0x130146DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516523== by 0x13014938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516523== by 0x12FCA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516523== by 0x12F6F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2516523== by 0xE05E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516523== by 0xDFF7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516523== by 0xCCCED38: PetscInitialize (pinit.c:924) ==2516523== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2516523== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2516523== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2516523== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2516523== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2516523== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2516523== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2516523== by 0x113935: main (TestCellSrn.cpp:18) ==2516523== ==2516523== Open file descriptor 116: ==2516523== ==2516523== ==2516523== Open file descriptor 112: ==2516523== ==2516523== ==2516523== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==2516523== ==2516523== ==2516523== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2516523== ==2516523== ==2516523== ==2516523== HEAP SUMMARY: ==2516523== in use at exit: 700,823 bytes in 9,379 blocks ==2516523== total heap usage: 65,081 allocs, 55,702 frees, 1,354,416,734 bytes allocated ==2516523== ==2516523== LEAK SUMMARY: ==2516523== definitely lost: 0 bytes in 0 blocks ==2516523== indirectly lost: 0 bytes in 0 blocks ==2516523== possibly lost: 0 bytes in 0 blocks ==2516523== still reachable: 120 bytes in 4 blocks ==2516523== suppressed: 700,703 bytes in 9,375 blocks ==2516523== Reachable blocks (those to which a pointer was found) are not shown. ==2516523== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2516523== ==2516523== For lists of detected and suppressed errors, rerun with: -s ==2516523== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)