==2517360== Memcheck, a memory error detector ==2517360== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2517360== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2517360== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==2517360== Parent PID: 2515385 ==2517360== ==2517360== ==2517360== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2517360== Open file descriptor 12: ==2517360== at 0x1014822D: pipe (pipe.c:29) ==2517360== by 0x18A1F07D: ??? ==2517360== by 0x13F824CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2517360== by 0xF969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2517360== by 0xF902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2517360== by 0xE5F9D38: PetscInitialize (pinit.c:924) ==2517360== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2517360== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2517360== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2517360== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2517360== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2517360== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2517360== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2517360== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2517360== ==2517360== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2517360== at 0x1014CBCC: __open_nocancel (open64_nocancel.c:39) ==2517360== by 0x100D0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2517360== by 0xE4A3822: ??? ==2517360== by 0xE4A396F: ??? ==2517360== by 0x140296DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2517360== by 0x14029938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2517360== by 0x13FDF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2517360== by 0x13F822DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2517360== by 0xF969418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2517360== by 0xF902D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2517360== by 0xE5F9D38: PetscInitialize (pinit.c:924) ==2517360== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2517360== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2517360== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2517360== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2517360== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2517360== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2517360== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2517360== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==2517360== ==2517360== Open file descriptor 116: ==2517360== ==2517360== ==2517360== Open file descriptor 112: ==2517360== ==2517360== ==2517360== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==2517360== ==2517360== ==2517360== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2517360== ==2517360== ==2517360== ==2517360== HEAP SUMMARY: ==2517360== in use at exit: 700,759 bytes in 9,378 blocks ==2517360== total heap usage: 856,536 allocs, 847,158 frees, 1,519,120,183 bytes allocated ==2517360== ==2517360== LEAK SUMMARY: ==2517360== definitely lost: 0 bytes in 0 blocks ==2517360== indirectly lost: 0 bytes in 0 blocks ==2517360== possibly lost: 0 bytes in 0 blocks ==2517360== still reachable: 56 bytes in 3 blocks ==2517360== suppressed: 700,703 bytes in 9,375 blocks ==2517360== Reachable blocks (those to which a pointer was found) are not shown. ==2517360== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2517360== ==2517360== For lists of detected and suppressed errors, rerun with: -s ==2517360== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)