==2516862== Memcheck, a memory error detector ==2516862== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2516862== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2516862== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMesh -malloc_debug -malloc_dump -memory_info ==2516862== Parent PID: 2515385 ==2516862== ==2516862== ==2516862== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2516862== Open file descriptor 12: ==2516862== at 0xE86522D: pipe (pipe.c:29) ==2516862== by 0x18A2107D: ??? ==2516862== by 0x13FD54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2516862== by 0x104C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516862== by 0x1045CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516862== by 0xF151D38: PetscInitialize (pinit.c:924) ==2516862== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2516862== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2516862== by 0x1387B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2516862== by 0x13323D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2516862== by 0x136272: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2516862== by 0x136112: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2516862== by 0x1367A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2516862== by 0x131665: main (TestPottsMesh.cpp:19) ==2516862== ==2516862== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2516862== at 0xE869BCC: __open_nocancel (open64_nocancel.c:39) ==2516862== by 0xE7EDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2516862== by 0xE4A3822: ??? ==2516862== by 0xE4A396F: ??? ==2516862== by 0x1407A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516862== by 0x1407A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516862== by 0x14030922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516862== by 0x13FD52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2516862== by 0x104C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516862== by 0x1045CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516862== by 0xF151D38: PetscInitialize (pinit.c:924) ==2516862== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2516862== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2516862== by 0x1387B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2516862== by 0x13323D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2516862== by 0x136272: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2516862== by 0x136112: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2516862== by 0x1367A9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2516862== by 0x131665: main (TestPottsMesh.cpp:19) ==2516862== ==2516862== Open file descriptor 116: ==2516862== ==2516862== ==2516862== Open file descriptor 112: ==2516862== ==2516862== ==2516862== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMesh_valgrind.txt ==2516862== ==2516862== ==2516862== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2516862== ==2516862== ==2516862== ==2516862== HEAP SUMMARY: ==2516862== in use at exit: 700,727 bytes in 9,377 blocks ==2516862== total heap usage: 81,027 allocs, 71,650 frees, 1,355,404,069 bytes allocated ==2516862== ==2516862== LEAK SUMMARY: ==2516862== definitely lost: 0 bytes in 0 blocks ==2516862== indirectly lost: 0 bytes in 0 blocks ==2516862== possibly lost: 0 bytes in 0 blocks ==2516862== still reachable: 24 bytes in 2 blocks ==2516862== suppressed: 700,703 bytes in 9,375 blocks ==2516862== Reachable blocks (those to which a pointer was found) are not shown. ==2516862== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2516862== ==2516862== For lists of detected and suppressed errors, rerun with: -s ==2516862== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)