==2516679== Memcheck, a memory error detector ==2516679== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2516679== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2516679== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==2516679== Parent PID: 2515385 ==2516679== ==2516679== ==2516679== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2516679== Open file descriptor 12: ==2516679== at 0x103BC22D: pipe (pipe.c:29) ==2516679== by 0x18A1F07D: ??? ==2516679== by 0x13F8B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2516679== by 0xFCC4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516679== by 0xFC5DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516679== by 0xE934D38: PetscInitialize (pinit.c:924) ==2516679== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2516679== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2516679== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2516679== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2516679== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2516679== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2516679== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2516679== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2516679== ==2516679== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2516679== at 0x103C0BCC: __open_nocancel (open64_nocancel.c:39) ==2516679== by 0x10344C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2516679== by 0xFBBE822: ??? ==2516679== by 0xFBBE96F: ??? ==2516679== by 0x140306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516679== by 0x14030938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516679== by 0x13FE6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2516679== by 0x13F8B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2516679== by 0xFCC4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516679== by 0xFC5DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2516679== by 0xE934D38: PetscInitialize (pinit.c:924) ==2516679== by 0xE80C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2516679== by 0xE80C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2516679== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2516679== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2516679== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2516679== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2516679== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2516679== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==2516679== ==2516679== Open file descriptor 116: ==2516679== ==2516679== ==2516679== Open file descriptor 112: ==2516679== ==2516679== ==2516679== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==2516679== ==2516679== ==2516679== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2516679== ==2516679== ==2516679== ==2516679== HEAP SUMMARY: ==2516679== in use at exit: 700,688 bytes in 9,374 blocks ==2516679== total heap usage: 7,732,901 allocs, 7,723,527 frees, 2,197,578,619 bytes allocated ==2516679== ==2516679== LEAK SUMMARY: ==2516679== definitely lost: 0 bytes in 0 blocks ==2516679== indirectly lost: 0 bytes in 0 blocks ==2516679== possibly lost: 0 bytes in 0 blocks ==2516679== still reachable: 56 bytes in 3 blocks ==2516679== suppressed: 700,632 bytes in 9,371 blocks ==2516679== Reachable blocks (those to which a pointer was found) are not shown. ==2516679== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2516679== ==2516679== For lists of detected and suppressed errors, rerun with: -s ==2516679== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)