==2628649== Memcheck, a memory error detector ==2628649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2628649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2628649== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==2628649== Parent PID: 2627514 ==2628649== ==2628649== ==2628649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2628649== Open file descriptor 12: ==2628649== at 0xE40F22D: pipe (pipe.c:29) ==2628649== by 0x18A2007D: ??? ==2628649== by 0x12F6F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2628649== by 0xE05E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2628649== by 0xDFF7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2628649== by 0xCCCED38: PetscInitialize (pinit.c:924) ==2628649== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2628649== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2628649== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2628649== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2628649== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2628649== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2628649== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2628649== by 0x113935: main (TestCellSrn.cpp:18) ==2628649== ==2628649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2628649== at 0xE413BCC: __open_nocancel (open64_nocancel.c:39) ==2628649== by 0xE397C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2628649== by 0xDF58822: ??? ==2628649== by 0xDF5896F: ??? ==2628649== by 0x130146DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2628649== by 0x13014938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2628649== by 0x12FCA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2628649== by 0x12F6F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2628649== by 0xE05E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2628649== by 0xDFF7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2628649== by 0xCCCED38: PetscInitialize (pinit.c:924) ==2628649== by 0xCBA4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2628649== by 0xCBA41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2628649== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2628649== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2628649== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2628649== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2628649== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2628649== by 0x113935: main (TestCellSrn.cpp:18) ==2628649== ==2628649== Open file descriptor 116: ==2628649== ==2628649== ==2628649== Open file descriptor 112: ==2628649== ==2628649== ==2628649== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==2628649== ==2628649== ==2628649== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2628649== ==2628649== ==2628649== ==2628649== HEAP SUMMARY: ==2628649== in use at exit: 700,823 bytes in 9,379 blocks ==2628649== total heap usage: 65,079 allocs, 55,700 frees, 1,354,415,891 bytes allocated ==2628649== ==2628649== LEAK SUMMARY: ==2628649== definitely lost: 0 bytes in 0 blocks ==2628649== indirectly lost: 0 bytes in 0 blocks ==2628649== possibly lost: 0 bytes in 0 blocks ==2628649== still reachable: 120 bytes in 4 blocks ==2628649== suppressed: 700,703 bytes in 9,375 blocks ==2628649== Reachable blocks (those to which a pointer was found) are not shown. ==2628649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2628649== ==2628649== For lists of detected and suppressed errors, rerun with: -s ==2628649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)