==2627517== Memcheck, a memory error detector ==2627517== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2627517== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2627517== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==2627517== Parent PID: 2627514 ==2627517== ==2627517== ==2627517== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2627517== Open file descriptor 12: ==2627517== at 0x4CB022D: pipe (pipe.c:29) ==2627517== by 0xAEA307D: ??? ==2627517== by 0x89B74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2627517== by 0x626A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2627517== by 0x6203D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2627517== by 0x4EFAD38: PetscInitialize (pinit.c:924) ==2627517== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2627517== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2627517== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==2627517== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==2627517== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==2627517== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==2627517== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==2627517== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==2627517== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2627517== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2627517== by 0x110C15: main (TestCitations.cpp:18) ==2627517== ==2627517== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2627517== at 0x4CB4BCC: __open_nocancel (open64_nocancel.c:39) ==2627517== by 0x4C38C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2627517== by 0x492E822: ??? ==2627517== by 0x492E96F: ??? ==2627517== by 0x8A5C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2627517== by 0x8A5C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2627517== by 0x8A12922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2627517== by 0x89B72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2627517== by 0x626A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2627517== by 0x6203D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2627517== by 0x4EFAD38: PetscInitialize (pinit.c:924) ==2627517== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2627517== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2627517== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==2627517== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==2627517== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==2627517== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==2627517== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==2627517== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==2627517== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2627517== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2627517== by 0x110C15: main (TestCitations.cpp:18) ==2627517== ==2627517== Open file descriptor 116: ==2627517== ==2627517== ==2627517== Open file descriptor 112: ==2627517== ==2627517== ==2627517== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==2627517== ==2627517== ==2627517== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2627517== ==2627517== ==2627517== ==2627517== HEAP SUMMARY: ==2627517== in use at exit: 700,263 bytes in 9,377 blocks ==2627517== total heap usage: 47,496 allocs, 38,119 frees, 1,353,400,284 bytes allocated ==2627517== ==2627517== LEAK SUMMARY: ==2627517== definitely lost: 0 bytes in 0 blocks ==2627517== indirectly lost: 0 bytes in 0 blocks ==2627517== possibly lost: 0 bytes in 0 blocks ==2627517== still reachable: 24 bytes in 2 blocks ==2627517== suppressed: 700,239 bytes in 9,375 blocks ==2627517== Reachable blocks (those to which a pointer was found) are not shown. ==2627517== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2627517== ==2627517== For lists of detected and suppressed errors, rerun with: -s ==2627517== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)