==2871023== Memcheck, a memory error detector ==2871023== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2871023== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2871023== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==2871023== Parent PID: 2852757 ==2871023== ==2871023== ==2871023== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2871023== Open file descriptor 12: ==2871023== at 0xA43022D: pipe (pipe.c:29) ==2871023== by 0x13F9407D: ??? ==2871023== by 0xF7984CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2871023== by 0xBB28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2871023== by 0xBAC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2871023== by 0xA7B8D38: PetscInitialize (pinit.c:924) ==2871023== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2871023== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2871023== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2871023== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2871023== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2871023== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2871023== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2871023== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==2871023== ==2871023== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2871023== at 0xA434BCC: __open_nocancel (open64_nocancel.c:39) ==2871023== by 0xA3B8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2871023== by 0x9D4F822: ??? ==2871023== by 0x9D4F96F: ??? ==2871023== by 0xF83D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2871023== by 0xF83D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2871023== by 0xF7F3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2871023== by 0xF7982DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2871023== by 0xBB28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2871023== by 0xBAC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2871023== by 0xA7B8D38: PetscInitialize (pinit.c:924) ==2871023== by 0x9D1B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2871023== by 0x9D1B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2871023== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2871023== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2871023== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2871023== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2871023== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2871023== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==2871023== ==2871023== Open file descriptor 116: ==2871023== ==2871023== ==2871023== Open file descriptor 112: ==2871023== ==2871023== ==2871023== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==2871023== ==2871023== ==2871023== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2871023== ==2871023== ==2871023== ==2871023== HEAP SUMMARY: ==2871023== in use at exit: 701,223 bytes in 9,387 blocks ==2871023== total heap usage: 837,324 allocs, 827,937 frees, 1,458,876,752 bytes allocated ==2871023== ==2871023== LEAK SUMMARY: ==2871023== definitely lost: 0 bytes in 0 blocks ==2871023== indirectly lost: 0 bytes in 0 blocks ==2871023== possibly lost: 0 bytes in 0 blocks ==2871023== still reachable: 24 bytes in 2 blocks ==2871023== suppressed: 701,199 bytes in 9,385 blocks ==2871023== Reachable blocks (those to which a pointer was found) are not shown. ==2871023== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2871023== ==2871023== For lists of detected and suppressed errors, rerun with: -s ==2871023== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)