==2917847== Memcheck, a memory error detector ==2917847== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2917847== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2917847== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==2917847== Parent PID: 2899594 ==2917847== ==2917847== ==2917847== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2917847== Open file descriptor 12: ==2917847== at 0x892222D: pipe (pipe.c:29) ==2917847== by 0x13F9407D: ??? ==2917847== by 0xEAD94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2917847== by 0xA01C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917847== by 0x9FB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917847== by 0x8CACD38: PetscInitialize (pinit.c:924) ==2917847== by 0x820F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2917847== by 0x820F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2917847== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2917847== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2917847== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2917847== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2917847== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2917847== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==2917847== ==2917847== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2917847== at 0x8926BCC: __open_nocancel (open64_nocancel.c:39) ==2917847== by 0x88AAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2917847== by 0x8243822: ??? ==2917847== by 0x824396F: ??? ==2917847== by 0xEB7E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2917847== by 0xEB7E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2917847== by 0xEB34922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2917847== by 0xEAD92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2917847== by 0xA01C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917847== by 0x9FB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2917847== by 0x8CACD38: PetscInitialize (pinit.c:924) ==2917847== by 0x820F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2917847== by 0x820F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2917847== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2917847== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2917847== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2917847== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2917847== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2917847== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==2917847== ==2917847== Open file descriptor 116: ==2917847== ==2917847== ==2917847== Open file descriptor 112: ==2917847== ==2917847== ==2917847== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==2917847== ==2917847== ==2917847== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2917847== ==2917847== ==2917847== ==2917847== HEAP SUMMARY: ==2917847== in use at exit: 708,476 bytes in 9,399 blocks ==2917847== total heap usage: 4,766,554 allocs, 4,757,155 frees, 2,853,432,164 bytes allocated ==2917847== ==2917847== LEAK SUMMARY: ==2917847== definitely lost: 0 bytes in 0 blocks ==2917847== indirectly lost: 0 bytes in 0 blocks ==2917847== possibly lost: 0 bytes in 0 blocks ==2917847== still reachable: 7,348 bytes in 18 blocks ==2917847== suppressed: 701,128 bytes in 9,381 blocks ==2917847== Reachable blocks (those to which a pointer was found) are not shown. ==2917847== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2917847== ==2917847== For lists of detected and suppressed errors, rerun with: -s ==2917847== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 231 from 34)