==2916166== Memcheck, a memory error detector ==2916166== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2916166== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2916166== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==2916166== Parent PID: 2899594 ==2916166== ==2916166== ==2916166== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2916166== Open file descriptor 12: ==2916166== at 0x9C6422D: pipe (pipe.c:29) ==2916166== by 0x13F9307D: ??? ==2916166== by 0xEA8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2916166== by 0x9897418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916166== by 0x9830D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916166== by 0x8507D38: PetscInitialize (pinit.c:924) ==2916166== by 0x83DF153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2916166== by 0x83DF1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2916166== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2916166== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2916166== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2916166== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2916166== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2916166== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==2916166== ==2916166== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2916166== at 0x9C68BCC: __open_nocancel (open64_nocancel.c:39) ==2916166== by 0x9BECC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2916166== by 0x9791822: ??? ==2916166== by 0x979196F: ??? ==2916166== by 0xEB316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2916166== by 0xEB31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2916166== by 0xEAE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2916166== by 0xEA8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2916166== by 0x9897418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916166== by 0x9830D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916166== by 0x8507D38: PetscInitialize (pinit.c:924) ==2916166== by 0x83DF153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2916166== by 0x83DF1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2916166== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2916166== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2916166== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2916166== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2916166== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2916166== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==2916166== ==2916166== Open file descriptor 116: ==2916166== ==2916166== ==2916166== Open file descriptor 112: ==2916166== ==2916166== ==2916166== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==2916166== ==2916166== ==2916166== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2916166== ==2916166== ==2916166== ==2916166== HEAP SUMMARY: ==2916166== in use at exit: 700,743 bytes in 9,377 blocks ==2916166== total heap usage: 76,145 allocs, 66,768 frees, 1,357,700,563 bytes allocated ==2916166== ==2916166== LEAK SUMMARY: ==2916166== definitely lost: 0 bytes in 0 blocks ==2916166== indirectly lost: 0 bytes in 0 blocks ==2916166== possibly lost: 0 bytes in 0 blocks ==2916166== still reachable: 24 bytes in 2 blocks ==2916166== suppressed: 700,719 bytes in 9,375 blocks ==2916166== Reachable blocks (those to which a pointer was found) are not shown. ==2916166== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2916166== ==2916166== For lists of detected and suppressed errors, rerun with: -s ==2916166== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)