==2916040== Memcheck, a memory error detector ==2916040== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2916040== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2916040== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestFibreReaderAbilityExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==2916040== Parent PID: 2899594 ==2916040== ==2916040== ==2916040== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2916040== Open file descriptor 12: ==2916040== at 0xA44C22D: pipe (pipe.c:29) ==2916040== by 0x13F9407D: ??? ==2916040== by 0xF7984CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2916040== by 0xBB44418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916040== by 0xBADDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916040== by 0xA7D4D38: PetscInitialize (pinit.c:924) ==2916040== by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2916040== by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2916040== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2916040== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2916040== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2916040== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2916040== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2916040== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==2916040== ==2916040== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2916040== at 0xA450BCC: __open_nocancel (open64_nocancel.c:39) ==2916040== by 0xA3D4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2916040== by 0x9D6B822: ??? ==2916040== by 0x9D6B96F: ??? ==2916040== by 0xF83D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2916040== by 0xF83D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2916040== by 0xF7F3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2916040== by 0xF7982DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2916040== by 0xBB44418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916040== by 0xBADDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2916040== by 0xA7D4D38: PetscInitialize (pinit.c:924) ==2916040== by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2916040== by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2916040== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2916040== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2916040== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2916040== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2916040== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2916040== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==2916040== ==2916040== Open file descriptor 116: ==2916040== ==2916040== ==2916040== Open file descriptor 112: ==2916040== ==2916040== ==2916040== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestFibreReaderAbilityExtendedBidomainProblem_valgrind.txt ==2916040== ==2916040== ==2916040== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2916040== ==2916040== ==2916040== ==2916040== HEAP SUMMARY: ==2916040== in use at exit: 700,743 bytes in 9,377 blocks ==2916040== total heap usage: 117,984 allocs, 108,607 frees, 1,358,023,435 bytes allocated ==2916040== ==2916040== LEAK SUMMARY: ==2916040== definitely lost: 0 bytes in 0 blocks ==2916040== indirectly lost: 0 bytes in 0 blocks ==2916040== possibly lost: 0 bytes in 0 blocks ==2916040== still reachable: 24 bytes in 2 blocks ==2916040== suppressed: 700,719 bytes in 9,375 blocks ==2916040== Reachable blocks (those to which a pointer was found) are not shown. ==2916040== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2916040== ==2916040== For lists of detected and suppressed errors, rerun with: -s ==2916040== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)