==2901302== Memcheck, a memory error detector ==2901302== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2901302== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2901302== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2901302== Parent PID: 2899594 ==2901302== ==2901302== ==2901302== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2901302== Open file descriptor 12: ==2901302== at 0xEC3B22D: pipe (pipe.c:29) ==2901302== by 0x18A1F07D: ??? ==2901302== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2901302== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2901302== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2901302== by 0xF496D38: PetscInitialize (pinit.c:924) ==2901302== by 0xE4FE153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2901302== by 0xE4FE1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2901302== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2901302== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2901302== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2901302== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2901302== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2901302== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==2901302== ==2901302== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2901302== at 0xEC3FBCC: __open_nocancel (open64_nocancel.c:39) ==2901302== by 0xEBC3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2901302== by 0xE532822: ??? ==2901302== by 0xE53296F: ??? ==2901302== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2901302== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2901302== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2901302== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2901302== by 0x10808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2901302== by 0x107A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2901302== by 0xF496D38: PetscInitialize (pinit.c:924) ==2901302== by 0xE4FE153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2901302== by 0xE4FE1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2901302== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2901302== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2901302== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2901302== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2901302== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2901302== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==2901302== ==2901302== Open file descriptor 116: ==2901302== ==2901302== ==2901302== Open file descriptor 112: ==2901302== ==2901302== ==2901302== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==2901302== ==2901302== ==2901302== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2901302== ==2901302== ==2901302== ==2901302== HEAP SUMMARY: ==2901302== in use at exit: 700,688 bytes in 9,374 blocks ==2901302== total heap usage: 20,194,341 allocs, 20,184,967 frees, 2,577,985,437 bytes allocated ==2901302== ==2901302== LEAK SUMMARY: ==2901302== definitely lost: 0 bytes in 0 blocks ==2901302== indirectly lost: 0 bytes in 0 blocks ==2901302== possibly lost: 0 bytes in 0 blocks ==2901302== still reachable: 56 bytes in 3 blocks ==2901302== suppressed: 700,632 bytes in 9,371 blocks ==2901302== Reachable blocks (those to which a pointer was found) are not shown. ==2901302== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2901302== ==2901302== For lists of detected and suppressed errors, rerun with: -s ==2901302== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)