==3066400== Memcheck, a memory error detector ==3066400== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3066400== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3066400== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==3066400== Parent PID: 3051093 ==3066400== ==3066400== ==3066400== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3066400== Open file descriptor 12: ==3066400== at 0x1038B22D: pipe (pipe.c:29) ==3066400== by 0x18A1E07D: ??? ==3066400== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3066400== by 0xFBAC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066400== by 0xFB45D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066400== by 0xE83CD38: PetscInitialize (pinit.c:924) ==3066400== by 0xE6B2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3066400== by 0xE6B21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3066400== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3066400== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3066400== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3066400== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3066400== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3066400== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==3066400== ==3066400== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3066400== at 0x1038FBCC: __open_nocancel (open64_nocancel.c:39) ==3066400== by 0x10313C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3066400== by 0xE6E6822: ??? ==3066400== by 0xE6E696F: ??? ==3066400== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3066400== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3066400== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3066400== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3066400== by 0xFBAC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066400== by 0xFB45D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066400== by 0xE83CD38: PetscInitialize (pinit.c:924) ==3066400== by 0xE6B2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3066400== by 0xE6B21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3066400== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3066400== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3066400== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3066400== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3066400== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3066400== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==3066400== ==3066400== Open file descriptor 116: ==3066400== ==3066400== ==3066400== Open file descriptor 112: ==3066400== ==3066400== ==3066400== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==3066400== ==3066400== ==3066400== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3066400== ==3066400== ==3066400== ==3066400== HEAP SUMMARY: ==3066400== in use at exit: 700,688 bytes in 9,374 blocks ==3066400== total heap usage: 3,820,529 allocs, 3,811,155 frees, 1,524,923,529 bytes allocated ==3066400== ==3066400== LEAK SUMMARY: ==3066400== definitely lost: 0 bytes in 0 blocks ==3066400== indirectly lost: 0 bytes in 0 blocks ==3066400== possibly lost: 0 bytes in 0 blocks ==3066400== still reachable: 56 bytes in 3 blocks ==3066400== suppressed: 700,632 bytes in 9,371 blocks ==3066400== Reachable blocks (those to which a pointer was found) are not shown. ==3066400== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3066400== ==3066400== For lists of detected and suppressed errors, rerun with: -s ==3066400== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)