==3053022== Memcheck, a memory error detector ==3053022== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3053022== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3053022== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==3053022== Parent PID: 3051093 ==3053022== ==3053022== ==3053022== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3053022== Open file descriptor 12: ==3053022== at 0xEC4F22D: pipe (pipe.c:29) ==3053022== by 0x18A1F07D: ??? ==3053022== by 0x140224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3053022== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3053022== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3053022== by 0xF57FD38: PetscInitialize (pinit.c:924) ==3053022== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3053022== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3053022== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3053022== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3053022== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3053022== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3053022== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3053022== by 0x133475: main (TestNumericalMethods.cpp:19) ==3053022== ==3053022== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3053022== at 0xEC53BCC: __open_nocancel (open64_nocancel.c:39) ==3053022== by 0xEBD7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3053022== by 0xE4A3822: ??? ==3053022== by 0xE4A396F: ??? ==3053022== by 0x140C76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3053022== by 0x140C7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3053022== by 0x1407D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3053022== by 0x140222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3053022== by 0x108EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3053022== by 0x10888D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3053022== by 0xF57FD38: PetscInitialize (pinit.c:924) ==3053022== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3053022== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3053022== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3053022== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3053022== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3053022== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3053022== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3053022== by 0x133475: main (TestNumericalMethods.cpp:19) ==3053022== ==3053022== Open file descriptor 116: ==3053022== ==3053022== ==3053022== Open file descriptor 112: ==3053022== ==3053022== ==3053022== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==3053022== ==3053022== ==3053022== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3053022== ==3053022== ==3053022== ==3053022== HEAP SUMMARY: ==3053022== in use at exit: 700,759 bytes in 9,378 blocks ==3053022== total heap usage: 70,919 allocs, 61,541 frees, 1,356,890,776 bytes allocated ==3053022== ==3053022== LEAK SUMMARY: ==3053022== definitely lost: 0 bytes in 0 blocks ==3053022== indirectly lost: 0 bytes in 0 blocks ==3053022== possibly lost: 0 bytes in 0 blocks ==3053022== still reachable: 56 bytes in 3 blocks ==3053022== suppressed: 700,703 bytes in 9,375 blocks ==3053022== Reachable blocks (those to which a pointer was found) are not shown. ==3053022== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3053022== ==3053022== For lists of detected and suppressed errors, rerun with: -s ==3053022== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)