==3066816== Memcheck, a memory error detector ==3066816== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3066816== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3066816== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSloughingCellKillers -malloc_debug -malloc_dump -memory_info ==3066816== Parent PID: 3051093 ==3066816== ==3066816== ==3066816== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3066816== Open file descriptor 12: ==3066816== at 0x11A0822D: pipe (pipe.c:29) ==3066816== by 0x1A6DF07D: ??? ==3066816== by 0x158434CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3066816== by 0x11229418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066816== by 0x111C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066816== by 0xFEB9D38: PetscInitialize (pinit.c:924) ==3066816== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3066816== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3066816== by 0x157559: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3066816== by 0x14FA79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3066816== by 0x152B30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3066816== by 0x1529D0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3066816== by 0x153067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3066816== by 0x14DE95: main (TestSloughingCellKillers.cpp:19) ==3066816== ==3066816== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3066816== at 0x11A0CBCC: __open_nocancel (open64_nocancel.c:39) ==3066816== by 0x11990C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3066816== by 0xFD63822: ??? ==3066816== by 0xFD6396F: ??? ==3066816== by 0x158E86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3066816== by 0x158E8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3066816== by 0x1589E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3066816== by 0x158432DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3066816== by 0x11229418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066816== by 0x111C2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3066816== by 0xFEB9D38: PetscInitialize (pinit.c:924) ==3066816== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3066816== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3066816== by 0x157559: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3066816== by 0x14FA79: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3066816== by 0x152B30: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3066816== by 0x1529D0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3066816== by 0x153067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3066816== by 0x14DE95: main (TestSloughingCellKillers.cpp:19) ==3066816== ==3066816== Open file descriptor 116: ==3066816== ==3066816== ==3066816== Open file descriptor 112: ==3066816== ==3066816== ==3066816== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSloughingCellKillers_valgrind.txt ==3066816== ==3066816== ==3066816== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3066816== ==3066816== ==3066816== ==3066816== HEAP SUMMARY: ==3066816== in use at exit: 700,775 bytes in 9,378 blocks ==3066816== total heap usage: 102,391 allocs, 93,013 frees, 1,357,499,684 bytes allocated ==3066816== ==3066816== LEAK SUMMARY: ==3066816== definitely lost: 0 bytes in 0 blocks ==3066816== indirectly lost: 0 bytes in 0 blocks ==3066816== possibly lost: 0 bytes in 0 blocks ==3066816== still reachable: 56 bytes in 3 blocks ==3066816== suppressed: 700,719 bytes in 9,375 blocks ==3066816== Reachable blocks (those to which a pointer was found) are not shown. ==3066816== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3066816== ==3066816== For lists of detected and suppressed errors, rerun with: -s ==3066816== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)