==3163971== Memcheck, a memory error detector ==3163971== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3163971== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3163971== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractCvodeSystem -malloc_debug -malloc_dump -memory_info ==3163971== Parent PID: 3163233 ==3163971== ==3163971== ==3163971== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3163971== Open file descriptor 12: ==3163971== at 0x643B22D: pipe (pipe.c:29) ==3163971== by 0xB1C907D: ??? ==3163971== by 0x8CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3163971== by 0x6039418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163971== by 0x5FD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163971== by 0x4CC9D38: PetscInitialize (pinit.c:924) ==3163971== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3163971== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3163971== by 0x136DA1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3163971== by 0x131171: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3163971== by 0x133ED4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3163971== by 0x133D74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3163971== by 0x13440B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3163971== by 0x12EFD5: main (TestAbstractCvodeSystem.cpp:19) ==3163971== ==3163971== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3163971== at 0x643FBCC: __open_nocancel (open64_nocancel.c:39) ==3163971== by 0x63C3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3163971== by 0x4B71822: ??? ==3163971== by 0x4B7196F: ??? ==3163971== by 0x8D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3163971== by 0x8D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3163971== by 0x8D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3163971== by 0x8CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3163971== by 0x6039418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163971== by 0x5FD2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163971== by 0x4CC9D38: PetscInitialize (pinit.c:924) ==3163971== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3163971== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3163971== by 0x136DA1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3163971== by 0x131171: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3163971== by 0x133ED4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3163971== by 0x133D74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3163971== by 0x13440B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3163971== by 0x12EFD5: main (TestAbstractCvodeSystem.cpp:19) ==3163971== ==3163971== Open file descriptor 116: ==3163971== ==3163971== ==3163971== Open file descriptor 112: ==3163971== ==3163971== ==3163971== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractCvodeSystem_valgrind.txt ==3163971== ==3163971== ==3163971== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3163971== ==3163971== ==3163971== ==3163971== HEAP SUMMARY: ==3163971== in use at exit: 700,311 bytes in 9,377 blocks ==3163971== total heap usage: 48,754 allocs, 39,377 frees, 1,353,442,361 bytes allocated ==3163971== ==3163971== LEAK SUMMARY: ==3163971== definitely lost: 0 bytes in 0 blocks ==3163971== indirectly lost: 0 bytes in 0 blocks ==3163971== possibly lost: 0 bytes in 0 blocks ==3163971== still reachable: 24 bytes in 2 blocks ==3163971== suppressed: 700,287 bytes in 9,375 blocks ==3163971== Reachable blocks (those to which a pointer was found) are not shown. ==3163971== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3163971== ==3163971== For lists of detected and suppressed errors, rerun with: -s ==3163971== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)