==3179622== Memcheck, a memory error detector ==3179622== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3179622== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3179622== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestArchivingExtendedBidomain -malloc_debug -malloc_dump -memory_info ==3179622== Parent PID: 3163233 ==3179622== ==3179622== ==3179622== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3179622== Open file descriptor 12: ==3179622== at 0xB9B822D: pipe (pipe.c:29) ==3179622== by 0x13F9407D: ??? ==3179622== by 0xF74B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3179622== by 0xB2A6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3179622== by 0xB23FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3179622== by 0x9F36D38: PetscInitialize (pinit.c:924) ==3179622== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3179622== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3179622== by 0x12EE9E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3179622== by 0x129BF3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3179622== by 0x12CABA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3179622== by 0x12C9B5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3179622== by 0x12CFC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3179622== by 0x1283A5: main (TestArchivingExtendedBidomain.cpp:18) ==3179622== ==3179622== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3179622== at 0xB9BCBCC: __open_nocancel (open64_nocancel.c:39) ==3179622== by 0xB940C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3179622== by 0x9DDE822: ??? ==3179622== by 0x9DDE96F: ??? ==3179622== by 0xF7F06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3179622== by 0xF7F0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3179622== by 0xF7A6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3179622== by 0xF74B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3179622== by 0xB2A6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3179622== by 0xB23FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3179622== by 0x9F36D38: PetscInitialize (pinit.c:924) ==3179622== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3179622== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3179622== by 0x12EE9E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3179622== by 0x129BF3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3179622== by 0x12CABA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3179622== by 0x12C9B5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3179622== by 0x12CFC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3179622== by 0x1283A5: main (TestArchivingExtendedBidomain.cpp:18) ==3179622== ==3179622== Open file descriptor 116: ==3179622== ==3179622== ==3179622== Open file descriptor 112: ==3179622== ==3179622== ==3179622== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestArchivingExtendedBidomain_valgrind.txt ==3179622== ==3179622== ==3179622== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3179622== ==3179622== ==3179622== ==3179622== HEAP SUMMARY: ==3179622== in use at exit: 701,223 bytes in 9,387 blocks ==3179622== total heap usage: 354,353 allocs, 344,966 frees, 1,455,215,800 bytes allocated ==3179622== ==3179622== LEAK SUMMARY: ==3179622== definitely lost: 0 bytes in 0 blocks ==3179622== indirectly lost: 0 bytes in 0 blocks ==3179622== possibly lost: 0 bytes in 0 blocks ==3179622== still reachable: 24 bytes in 2 blocks ==3179622== suppressed: 701,199 bytes in 9,385 blocks ==3179622== Reachable blocks (those to which a pointer was found) are not shown. ==3179622== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3179622== ==3179622== For lists of detected and suppressed errors, rerun with: -s ==3179622== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 55 from 38)