==3163993== Memcheck, a memory error detector ==3163993== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3163993== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3163993== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestCombinedOdeSystem -malloc_debug -malloc_dump -memory_info ==3163993== Parent PID: 3163233 ==3163993== ==3163993== ==3163993== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3163993== Open file descriptor 12: ==3163993== at 0x4F0D22D: pipe (pipe.c:29) ==3163993== by 0xB1E507D: ??? ==3163993== by 0x8CDA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3163993== by 0x6674418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163993== by 0x660DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163993== by 0x5304D38: PetscInitialize (pinit.c:924) ==3163993== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3163993== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3163993== by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3163993== by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3163993== by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3163993== by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3163993== by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3163993== by 0x118A75: main (TestCombinedOdeSystem.cpp:18) ==3163993== ==3163993== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3163993== at 0x4F11BCC: __open_nocancel (open64_nocancel.c:39) ==3163993== by 0x4E95C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3163993== by 0x4B71822: ??? ==3163993== by 0x4B7196F: ??? ==3163993== by 0x8D7F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3163993== by 0x8D7F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3163993== by 0x8D35922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3163993== by 0x8CDA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3163993== by 0x6674418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163993== by 0x660DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3163993== by 0x5304D38: PetscInitialize (pinit.c:924) ==3163993== by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3163993== by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3163993== by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3163993== by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3163993== by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3163993== by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3163993== by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3163993== by 0x118A75: main (TestCombinedOdeSystem.cpp:18) ==3163993== ==3163993== Open file descriptor 116: ==3163993== ==3163993== ==3163993== Open file descriptor 112: ==3163993== ==3163993== ==3163993== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCombinedOdeSystem_valgrind.txt ==3163993== ==3163993== ==3163993== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3163993== ==3163993== ==3163993== ==3163993== HEAP SUMMARY: ==3163993== in use at exit: 700,327 bytes in 9,377 blocks ==3163993== total heap usage: 48,358 allocs, 38,981 frees, 1,353,334,260 bytes allocated ==3163993== ==3163993== LEAK SUMMARY: ==3163993== definitely lost: 0 bytes in 0 blocks ==3163993== indirectly lost: 0 bytes in 0 blocks ==3163993== possibly lost: 0 bytes in 0 blocks ==3163993== still reachable: 24 bytes in 2 blocks ==3163993== suppressed: 700,303 bytes in 9,375 blocks ==3163993== Reachable blocks (those to which a pointer was found) are not shown. ==3163993== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3163993== ==3163993== For lists of detected and suppressed errors, rerun with: -s ==3163993== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)