==3164229== Memcheck, a memory error detector ==3164229== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3164229== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3164229== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==3164229== Parent PID: 3163233 ==3164229== ==3164229== ==3164229== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3164229== Open file descriptor 12: ==3164229== at 0x6FAF22D: pipe (pipe.c:29) ==3164229== by 0x1014207D: ??? ==3164229== by 0xC2714CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3164229== by 0x8A24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164229== by 0x89BDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164229== by 0x72FDD38: PetscInitialize (pinit.c:924) ==3164229== by 0x6562153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3164229== by 0x65621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3164229== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3164229== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3164229== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3164229== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3164229== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3164229== by 0x11B235: main (TestHdf5Converters.cpp:18) ==3164229== ==3164229== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3164229== at 0x6FB3BCC: __open_nocancel (open64_nocancel.c:39) ==3164229== by 0x6F37C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3164229== by 0x6596822: ??? ==3164229== by 0x659696F: ??? ==3164229== by 0xC3166DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3164229== by 0xC316938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3164229== by 0xC2CC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3164229== by 0xC2712DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3164229== by 0x8A24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164229== by 0x89BDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164229== by 0x72FDD38: PetscInitialize (pinit.c:924) ==3164229== by 0x6562153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3164229== by 0x65621A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3164229== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3164229== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3164229== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3164229== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3164229== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3164229== by 0x11B235: main (TestHdf5Converters.cpp:18) ==3164229== ==3164229== Open file descriptor 116: ==3164229== ==3164229== ==3164229== Open file descriptor 112: ==3164229== ==3164229== ==3164229== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==3164229== ==3164229== ==3164229== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3164229== ==3164229== ==3164229== ==3164229== HEAP SUMMARY: ==3164229== in use at exit: 700,663 bytes in 9,377 blocks ==3164229== total heap usage: 208,753 allocs, 199,376 frees, 1,409,965,297 bytes allocated ==3164229== ==3164229== LEAK SUMMARY: ==3164229== definitely lost: 0 bytes in 0 blocks ==3164229== indirectly lost: 0 bytes in 0 blocks ==3164229== possibly lost: 0 bytes in 0 blocks ==3164229== still reachable: 24 bytes in 2 blocks ==3164229== suppressed: 700,639 bytes in 9,375 blocks ==3164229== Reachable blocks (those to which a pointer was found) are not shown. ==3164229== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3164229== ==3164229== For lists of detected and suppressed errors, rerun with: -s ==3164229== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)