==3178866== Memcheck, a memory error detector ==3178866== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3178866== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3178866== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestMirams2010WntOdeSystem -malloc_debug -malloc_dump -memory_info ==3178866== Parent PID: 3163233 ==3178866== ==3178866== ==3178866== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3178866== Open file descriptor 12: ==3178866== at 0xEA9F22D: pipe (pipe.c:29) ==3178866== by 0x1A6E107D: ??? ==3178866== by 0x158E14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3178866== by 0x121AF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178866== by 0x12148D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178866== by 0x10E3FD38: PetscInitialize (pinit.c:924) ==3178866== by 0xE6A9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3178866== by 0xE6A91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3178866== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3178866== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3178866== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3178866== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3178866== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3178866== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==3178866== ==3178866== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3178866== at 0xEAA3BCC: __open_nocancel (open64_nocancel.c:39) ==3178866== by 0xEA27C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3178866== by 0xE6DD822: ??? ==3178866== by 0xE6DD96F: ??? ==3178866== by 0x159866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3178866== by 0x15986938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3178866== by 0x1593C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3178866== by 0x158E12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3178866== by 0x121AF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178866== by 0x12148D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178866== by 0x10E3FD38: PetscInitialize (pinit.c:924) ==3178866== by 0xE6A9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3178866== by 0xE6A91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3178866== by 0x1261EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3178866== by 0x12141B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3178866== by 0x123B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3178866== by 0x123A5C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3178866== by 0x12406F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3178866== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==3178866== ==3178866== Open file descriptor 116: ==3178866== ==3178866== ==3178866== Open file descriptor 112: ==3178866== ==3178866== ==3178866== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMirams2010WntOdeSystem_valgrind.txt ==3178866== ==3178866== ==3178866== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3178866== ==3178866== ==3178866== ==3178866== HEAP SUMMARY: ==3178866== in use at exit: 700,775 bytes in 9,378 blocks ==3178866== total heap usage: 68,562 allocs, 59,184 frees, 1,355,400,575 bytes allocated ==3178866== ==3178866== LEAK SUMMARY: ==3178866== definitely lost: 0 bytes in 0 blocks ==3178866== indirectly lost: 0 bytes in 0 blocks ==3178866== possibly lost: 0 bytes in 0 blocks ==3178866== still reachable: 56 bytes in 3 blocks ==3178866== suppressed: 700,719 bytes in 9,375 blocks ==3178866== Reachable blocks (those to which a pointer was found) are not shown. ==3178866== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3178866== ==3178866== For lists of detected and suppressed errors, rerun with: -s ==3178866== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)