==3164435== Memcheck, a memory error detector ==3164435== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3164435== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3164435== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==3164435== Parent PID: 3163233 ==3164435== ==3164435== ==3164435== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3164435== Open file descriptor 12: ==3164435== at 0xE69622D: pipe (pipe.c:29) ==3164435== by 0x18A1E07D: ??? ==3164435== by 0x12FC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3164435== by 0xE2E3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164435== by 0xE27CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164435== by 0xCF73D38: PetscInitialize (pinit.c:924) ==3164435== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3164435== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3164435== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3164435== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3164435== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3164435== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3164435== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3164435== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==3164435== ==3164435== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3164435== at 0xE69ABCC: __open_nocancel (open64_nocancel.c:39) ==3164435== by 0xE61EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3164435== by 0xCE1D822: ??? ==3164435== by 0xCE1D96F: ??? ==3164435== by 0x130656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3164435== by 0x13065938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3164435== by 0x1301B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3164435== by 0x12FC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3164435== by 0xE2E3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164435== by 0xE27CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3164435== by 0xCF73D38: PetscInitialize (pinit.c:924) ==3164435== by 0xCDE9153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3164435== by 0xCDE91A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3164435== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3164435== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3164435== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3164435== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3164435== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3164435== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==3164435== ==3164435== Open file descriptor 116: ==3164435== ==3164435== ==3164435== Open file descriptor 112: ==3164435== ==3164435== ==3164435== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==3164435== ==3164435== ==3164435== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3164435== ==3164435== ==3164435== ==3164435== HEAP SUMMARY: ==3164435== in use at exit: 700,704 bytes in 9,375 blocks ==3164435== total heap usage: 4,181,037 allocs, 4,171,662 frees, 1,785,103,666 bytes allocated ==3164435== ==3164435== LEAK SUMMARY: ==3164435== definitely lost: 0 bytes in 0 blocks ==3164435== indirectly lost: 0 bytes in 0 blocks ==3164435== possibly lost: 0 bytes in 0 blocks ==3164435== still reachable: 72 bytes in 4 blocks ==3164435== suppressed: 700,632 bytes in 9,371 blocks ==3164435== Reachable blocks (those to which a pointer was found) are not shown. ==3164435== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3164435== ==3164435== For lists of detected and suppressed errors, rerun with: -s ==3164435== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)