==3178965== Memcheck, a memory error detector ==3178965== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3178965== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3178965== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==3178965== Parent PID: 3163233 ==3178965== ==3178965== ==3178965== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3178965== Open file descriptor 12: ==3178965== at 0x118DF22D: pipe (pipe.c:29) ==3178965== by 0x1A6DF07D: ??? ==3178965== by 0x158434CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3178965== by 0x111E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178965== by 0x11180D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178965== by 0xFE57D38: PetscInitialize (pinit.c:924) ==3178965== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3178965== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3178965== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3178965== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3178965== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3178965== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3178965== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3178965== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==3178965== ==3178965== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3178965== at 0x118E3BCC: __open_nocancel (open64_nocancel.c:39) ==3178965== by 0x11867C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3178965== by 0x110E1822: ??? ==3178965== by 0x110E196F: ??? ==3178965== by 0x158E86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3178965== by 0x158E8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3178965== by 0x1589E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3178965== by 0x158432DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3178965== by 0x111E7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178965== by 0x11180D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3178965== by 0xFE57D38: PetscInitialize (pinit.c:924) ==3178965== by 0xFD2F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3178965== by 0xFD2F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3178965== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3178965== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3178965== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3178965== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3178965== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3178965== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==3178965== ==3178965== Open file descriptor 116: ==3178965== ==3178965== ==3178965== Open file descriptor 112: ==3178965== ==3178965== ==3178965== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==3178965== ==3178965== ==3178965== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3178965== ==3178965== ==3178965== ==3178965== HEAP SUMMARY: ==3178965== in use at exit: 700,855 bytes in 9,379 blocks ==3178965== total heap usage: 55,635 allocs, 46,256 frees, 1,353,990,032 bytes allocated ==3178965== ==3178965== LEAK SUMMARY: ==3178965== definitely lost: 0 bytes in 0 blocks ==3178965== indirectly lost: 0 bytes in 0 blocks ==3178965== possibly lost: 0 bytes in 0 blocks ==3178965== still reachable: 136 bytes in 4 blocks ==3178965== suppressed: 700,719 bytes in 9,375 blocks ==3178965== Reachable blocks (those to which a pointer was found) are not shown. ==3178965== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3178965== ==3178965== For lists of detected and suppressed errors, rerun with: -s ==3178965== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)