==3205344== Memcheck, a memory error detector ==3205344== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3205344== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3205344== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==3205344== Parent PID: 3205341 ==3205344== ==3205344== ==3205344== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3205344== Open file descriptor 12: ==3205344== at 0x4CB022D: pipe (pipe.c:29) ==3205344== by 0xAEA307D: ??? ==3205344== by 0x89B74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3205344== by 0x626A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3205344== by 0x6203D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3205344== by 0x4EFAD38: PetscInitialize (pinit.c:924) ==3205344== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3205344== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3205344== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==3205344== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==3205344== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==3205344== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==3205344== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==3205344== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==3205344== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3205344== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3205344== by 0x110C15: main (TestCitations.cpp:18) ==3205344== ==3205344== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3205344== at 0x4CB4BCC: __open_nocancel (open64_nocancel.c:39) ==3205344== by 0x4C38C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3205344== by 0x492E822: ??? ==3205344== by 0x492E96F: ??? ==3205344== by 0x8A5C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3205344== by 0x8A5C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3205344== by 0x8A12922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3205344== by 0x89B72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3205344== by 0x626A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3205344== by 0x6203D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3205344== by 0x4EFAD38: PetscInitialize (pinit.c:924) ==3205344== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3205344== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3205344== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==3205344== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==3205344== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==3205344== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==3205344== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==3205344== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==3205344== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3205344== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3205344== by 0x110C15: main (TestCitations.cpp:18) ==3205344== ==3205344== Open file descriptor 116: ==3205344== ==3205344== ==3205344== Open file descriptor 112: ==3205344== ==3205344== ==3205344== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==3205344== ==3205344== ==3205344== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3205344== ==3205344== ==3205344== ==3205344== HEAP SUMMARY: ==3205344== in use at exit: 700,263 bytes in 9,377 blocks ==3205344== total heap usage: 47,495 allocs, 38,118 frees, 1,353,401,024 bytes allocated ==3205344== ==3205344== LEAK SUMMARY: ==3205344== definitely lost: 0 bytes in 0 blocks ==3205344== indirectly lost: 0 bytes in 0 blocks ==3205344== possibly lost: 0 bytes in 0 blocks ==3205344== still reachable: 24 bytes in 2 blocks ==3205344== suppressed: 700,239 bytes in 9,375 blocks ==3205344== Reachable blocks (those to which a pointer was found) are not shown. ==3205344== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3205344== ==3205344== For lists of detected and suppressed errors, rerun with: -s ==3205344== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)