==3261972== Memcheck, a memory error detector ==3261972== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3261972== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3261972== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==3261972== Parent PID: 3245552 ==3261972== ==3261972== ==3261972== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3261972== Open file descriptor 12: ==3261972== at 0xA5F622D: pipe (pipe.c:29) ==3261972== by 0x13F9407D: ??? ==3261972== by 0xD5864CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3261972== by 0x9EE4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261972== by 0x9E7DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261972== by 0xA980D38: PetscInitialize (pinit.c:924) ==3261972== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3261972== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3261972== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3261972== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3261972== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3261972== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3261972== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3261972== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==3261972== ==3261972== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3261972== at 0xA5FABCC: __open_nocancel (open64_nocancel.c:39) ==3261972== by 0xA57EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3261972== by 0x9DDE822: ??? ==3261972== by 0x9DDE96F: ??? ==3261972== by 0xD62B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3261972== by 0xD62B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3261972== by 0xD5E1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3261972== by 0xD5862DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3261972== by 0x9EE4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261972== by 0x9E7DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261972== by 0xA980D38: PetscInitialize (pinit.c:924) ==3261972== by 0x9DAA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3261972== by 0x9DAA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3261972== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3261972== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3261972== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3261972== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3261972== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3261972== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==3261972== ==3261972== Open file descriptor 116: ==3261972== ==3261972== ==3261972== Open file descriptor 112: ==3261972== ==3261972== ==3261972== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==3261972== ==3261972== ==3261972== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3261972== ==3261972== ==3261972== ==3261972== HEAP SUMMARY: ==3261972== in use at exit: 701,152 bytes in 9,383 blocks ==3261972== total heap usage: 2,375,401 allocs, 2,366,018 frees, 2,483,497,961 bytes allocated ==3261972== ==3261972== LEAK SUMMARY: ==3261972== definitely lost: 0 bytes in 0 blocks ==3261972== indirectly lost: 0 bytes in 0 blocks ==3261972== possibly lost: 0 bytes in 0 blocks ==3261972== still reachable: 24 bytes in 2 blocks ==3261972== suppressed: 701,128 bytes in 9,381 blocks ==3261972== Reachable blocks (those to which a pointer was found) are not shown. ==3261972== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3261972== ==3261972== For lists of detected and suppressed errors, rerun with: -s ==3261972== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)