==3261208== Memcheck, a memory error detector ==3261208== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3261208== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3261208== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==3261208== Parent PID: 3245552 ==3261208== ==3261208== ==3261208== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3261208== Open file descriptor 12: ==3261208== at 0x11B6422D: pipe (pipe.c:29) ==3261208== by 0x1A6DF07D: ??? ==3261208== by 0x158944CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3261208== by 0x1146E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261208== by 0x11407D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261208== by 0x100FCD38: PetscInitialize (pinit.c:924) ==3261208== by 0xFF72153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3261208== by 0xFF721A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3261208== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3261208== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3261208== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3261208== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3261208== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3261208== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==3261208== ==3261208== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3261208== at 0x11B68BCC: __open_nocancel (open64_nocancel.c:39) ==3261208== by 0x11AECC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3261208== by 0xFFA6822: ??? ==3261208== by 0xFFA696F: ??? ==3261208== by 0x159396DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3261208== by 0x15939938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3261208== by 0x158EF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3261208== by 0x158942DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3261208== by 0x1146E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261208== by 0x11407D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3261208== by 0x100FCD38: PetscInitialize (pinit.c:924) ==3261208== by 0xFF72153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3261208== by 0xFF721A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3261208== by 0x136AAD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3261208== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3261208== by 0x1340EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3261208== by 0x133F8C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3261208== by 0x134623: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3261208== by 0x12F765: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==3261208== ==3261208== Open file descriptor 116: ==3261208== ==3261208== ==3261208== Open file descriptor 112: ==3261208== ==3261208== ==3261208== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==3261208== ==3261208== ==3261208== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3261208== ==3261208== ==3261208== ==3261208== HEAP SUMMARY: ==3261208== in use at exit: 700,743 bytes in 9,377 blocks ==3261208== total heap usage: 521,193 allocs, 511,816 frees, 1,562,151,599 bytes allocated ==3261208== ==3261208== LEAK SUMMARY: ==3261208== definitely lost: 0 bytes in 0 blocks ==3261208== indirectly lost: 0 bytes in 0 blocks ==3261208== possibly lost: 0 bytes in 0 blocks ==3261208== still reachable: 24 bytes in 2 blocks ==3261208== suppressed: 700,719 bytes in 9,375 blocks ==3261208== Reachable blocks (those to which a pointer was found) are not shown. ==3261208== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3261208== ==3261208== For lists of detected and suppressed errors, rerun with: -s ==3261208== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)