==217299== Memcheck, a memory error detector
==217299== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==217299== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==217299== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestCombinedOdeSystem -malloc_debug -malloc_dump -memory_info
==217299== Parent PID: 216543
==217299== 
==217299== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints.
==217299==    This could cause spurious value errors to appear.
==217299==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==217299== Warning: noted but unhandled ioctl 0x27 with no size/direction hints.
==217299==    This could cause spurious value errors to appear.
==217299==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==217299== Warning: noted but unhandled ioctl 0x25 with no size/direction hints.
==217299==    This could cause spurious value errors to appear.
==217299==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==217299== Warning: noted but unhandled ioctl 0x17 with no size/direction hints.
==217299==    This could cause spurious value errors to appear.
==217299==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==217299== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess)
==217299== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess)
==217299== Warning: set address range perms: large range [0x1051f000, 0x3051e000) (noaccess)
==217299== 
==217299== FILE DESCRIPTORS: 14 open (3 std) at exit.
==217299== Open file descriptor 23: /dev/nvidia0
==217299==    at 0x4F17764: open (open64.c:41)
==217299==    by 0xF5CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF5CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF666B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF554026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF55D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF5D5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF65FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF41A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF3648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0x87A3023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0x87A3FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0xB1F846A: ???
==217299==    by 0x8DF6F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8DD2B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8D83CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8CB0EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0xB1E6F03: ???
==217299==    by 0x8CE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0x667F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x6618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x530FD38: PetscInitialize (pinit.c:924)
==217299==    by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==217299==    by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==217299==    by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==217299==    by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==217299==    by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==217299==    by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==217299==    by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==217299==    by 0x118A75: main (TestCombinedOdeSystem.cpp:18)
==217299== 
==217299== Open file descriptor 22: /dev/nvidia0
==217299==    at 0x4F17764: open (open64.c:41)
==217299==    by 0xF5CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF5CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF55407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF55D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF5D5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF65FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF41A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF3648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0x87A3023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0x87A3FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0xB1F846A: ???
==217299==    by 0x8DF6F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8DD2B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8D83CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8CB0EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0xB1E6F03: ???
==217299==    by 0x8CE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0x667F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x6618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x530FD38: PetscInitialize (pinit.c:924)
==217299==    by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==217299==    by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==217299==    by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==217299==    by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==217299==    by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==217299==    by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==217299==    by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==217299==    by 0x118A75: main (TestCombinedOdeSystem.cpp:18)
==217299== 
==217299== Open file descriptor 21: /dev/nvidia0
==217299==    at 0x4F17764: open (open64.c:41)
==217299==    by 0xF5CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF5CC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF55DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF5D54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF65FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF41A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF3648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0x87A3023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0x87A3FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0xB1F846A: ???
==217299==    by 0x8DF6F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8DD2B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8D83CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8CB0EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0xB1E6F03: ???
==217299==    by 0x8CE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0x667F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x6618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x530FD38: PetscInitialize (pinit.c:924)
==217299==    by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==217299==    by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==217299==    by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==217299==    by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==217299==    by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==217299==    by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==217299==    by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==217299==    by 0x118A75: main (TestCombinedOdeSystem.cpp:18)
==217299== 
==217299== Open file descriptor 20: /dev/nvidia-uvm
==217299==    at 0x4F17764: open (open64.c:41)
==217299==    by 0xF436F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF41A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF3648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0x87A3023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0x87A3FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0xB1F846A: ???
==217299==    by 0x8DF6F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8DD2B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8D83CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8CB0EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0xB1E6F03: ???
==217299==    by 0x8CE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0x667F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x6618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x530FD38: PetscInitialize (pinit.c:924)
==217299==    by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==217299==    by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==217299==    by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==217299==    by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==217299==    by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==217299==    by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==217299==    by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==217299==    by 0x118A75: main (TestCombinedOdeSystem.cpp:18)
==217299== 
==217299== Open file descriptor 19: /dev/nvidiactl
==217299==    at 0x4F17764: open (open64.c:41)
==217299==    by 0xF5CB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF5D08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF41A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0xF3648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==217299==    by 0x87A3023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0x87A3FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==217299==    by 0xB1F846A: ???
==217299==    by 0x8DF6F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8DD2B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==217299==    by 0x8D83CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8CB0EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0xB1E6F03: ???
==217299==    by 0x8CE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0x667F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x6618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x530FD38: PetscInitialize (pinit.c:924)
==217299==    by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==217299==    by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==217299==    by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==217299==    by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==217299==    by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==217299==    by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==217299==    by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==217299==    by 0x118A75: main (TestCombinedOdeSystem.cpp:18)
==217299== 
==217299== Open file descriptor 12:
==217299==    at 0x4F1822D: pipe (pipe.c:29)
==217299==    by 0xB1E607D: ???
==217299==    by 0x8CE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0x667F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x6618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x530FD38: PetscInitialize (pinit.c:924)
==217299==    by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==217299==    by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==217299==    by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==217299==    by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==217299==    by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==217299==    by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==217299==    by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==217299==    by 0x118A75: main (TestCombinedOdeSystem.cpp:18)
==217299== 
==217299== Open file descriptor 8: /dev/shm/open_mpi.0000
==217299==    at 0x4F1CBCC: __open_nocancel (open64_nocancel.c:39)
==217299==    by 0x4EA0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40)
==217299==    by 0x4B71822: ???
==217299==    by 0x4B7196F: ???
==217299==    by 0x8D8A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8D8A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8D40922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==217299==    by 0x8CE52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==217299==    by 0x667F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x6618D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==217299==    by 0x530FD38: PetscInitialize (pinit.c:924)
==217299==    by 0x4B3D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==217299==    by 0x4B3D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==217299==    by 0x11FE4A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==217299==    by 0x11AEED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==217299==    by 0x11DACC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==217299==    by 0x11D9C7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==217299==    by 0x11DFDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==217299==    by 0x118A75: main (TestCombinedOdeSystem.cpp:18)
==217299== 
==217299== Open file descriptor 109:
==217299==    <inherited from parent>
==217299== 
==217299== Open file descriptor 106:
==217299==    <inherited from parent>
==217299== 
==217299== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCombinedOdeSystem_valgrind.txt
==217299==    <inherited from parent>
==217299== 
==217299== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==217299==    <inherited from parent>
==217299== 
==217299== 
==217299== HEAP SUMMARY:
==217299==     in use at exit: 1,875,319 bytes in 11,738 blocks
==217299==   total heap usage: 54,608 allocs, 42,870 frees, 1,532,885,335 bytes allocated
==217299== 
==217299== LEAK SUMMARY:
==217299==    definitely lost: 0 bytes in 0 blocks
==217299==    indirectly lost: 0 bytes in 0 blocks
==217299==      possibly lost: 0 bytes in 0 blocks
==217299==    still reachable: 24 bytes in 2 blocks
==217299==         suppressed: 1,875,295 bytes in 11,736 blocks
==217299== Reachable blocks (those to which a pointer was found) are not shown.
==217299== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==217299== 
==217299== For lists of detected and suppressed errors, rerun with: -s
==217299== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 50 from 50)