==234865== Memcheck, a memory error detector
==234865== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==234865== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==234865== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestSpiralWaveAndPhase -malloc_debug -malloc_dump -memory_info
==234865== Parent PID: 216543
==234865== 
==234865== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints.
==234865==    This could cause spurious value errors to appear.
==234865==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==234865== Warning: noted but unhandled ioctl 0x27 with no size/direction hints.
==234865==    This could cause spurious value errors to appear.
==234865==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==234865== Warning: noted but unhandled ioctl 0x25 with no size/direction hints.
==234865==    This could cause spurious value errors to appear.
==234865==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==234865== Warning: noted but unhandled ioctl 0x17 with no size/direction hints.
==234865==    This could cause spurious value errors to appear.
==234865==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==234865== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess)
==234865== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess)
==234865== Warning: set address range perms: large range [0x1351f000, 0x3351e000) (noaccess)
==234865== 
==234865== FILE DESCRIPTORS: 14 open (3 std) at exit.
==234865== Open file descriptor 23: /dev/nvidia0
==234865==    at 0x813F764: open (open64.c:41)
==234865==    by 0x125CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x125CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x12666B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x12554026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1255D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x125D5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1265FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1241A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x123648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0xB544023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0xB544FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0x1015546A: ???
==234865==    by 0xC0F0F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC0CCB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC07DCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xBFAAEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x10143F03: ???
==234865==    by 0xBFDF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x87C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x875BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x66FDD38: PetscInitialize (pinit.c:924)
==234865==    by 0x65D5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==234865==    by 0x65D51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==234865==    by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==234865==    by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==234865==    by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==234865==    by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==234865==    by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==234865==    by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18)
==234865== 
==234865== Open file descriptor 22: /dev/nvidia0
==234865==    at 0x813F764: open (open64.c:41)
==234865==    by 0x125CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x125CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1255407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1255D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x125D5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1265FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1241A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x123648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0xB544023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0xB544FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0x1015546A: ???
==234865==    by 0xC0F0F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC0CCB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC07DCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xBFAAEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x10143F03: ???
==234865==    by 0xBFDF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x87C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x875BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x66FDD38: PetscInitialize (pinit.c:924)
==234865==    by 0x65D5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==234865==    by 0x65D51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==234865==    by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==234865==    by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==234865==    by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==234865==    by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==234865==    by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==234865==    by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18)
==234865== 
==234865== Open file descriptor 21: /dev/nvidia0
==234865==    at 0x813F764: open (open64.c:41)
==234865==    by 0x125CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x125CC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1255DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x125D54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1265FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1241A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x123648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0xB544023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0xB544FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0x1015546A: ???
==234865==    by 0xC0F0F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC0CCB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC07DCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xBFAAEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x10143F03: ???
==234865==    by 0xBFDF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x87C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x875BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x66FDD38: PetscInitialize (pinit.c:924)
==234865==    by 0x65D5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==234865==    by 0x65D51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==234865==    by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==234865==    by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==234865==    by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==234865==    by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==234865==    by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==234865==    by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18)
==234865== 
==234865== Open file descriptor 20: /dev/nvidia-uvm
==234865==    at 0x813F764: open (open64.c:41)
==234865==    by 0x12436F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1241A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x123648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0xB544023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0xB544FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0x1015546A: ???
==234865==    by 0xC0F0F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC0CCB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC07DCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xBFAAEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x10143F03: ???
==234865==    by 0xBFDF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x87C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x875BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x66FDD38: PetscInitialize (pinit.c:924)
==234865==    by 0x65D5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==234865==    by 0x65D51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==234865==    by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==234865==    by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==234865==    by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==234865==    by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==234865==    by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==234865==    by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18)
==234865== 
==234865== Open file descriptor 19: /dev/nvidiactl
==234865==    at 0x813F764: open (open64.c:41)
==234865==    by 0x125CB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x125D08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x1241A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0x123648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==234865==    by 0xB544023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0xB544FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==234865==    by 0x1015546A: ???
==234865==    by 0xC0F0F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC0CCB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==234865==    by 0xC07DCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xBFAAEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x10143F03: ???
==234865==    by 0xBFDF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x87C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x875BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x66FDD38: PetscInitialize (pinit.c:924)
==234865==    by 0x65D5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==234865==    by 0x65D51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==234865==    by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==234865==    by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==234865==    by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==234865==    by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==234865==    by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==234865==    by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18)
==234865== 
==234865== Open file descriptor 12:
==234865==    at 0x814022D: pipe (pipe.c:29)
==234865==    by 0x1014307D: ???
==234865==    by 0xBFDF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x87C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x875BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x66FDD38: PetscInitialize (pinit.c:924)
==234865==    by 0x65D5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==234865==    by 0x65D51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==234865==    by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==234865==    by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==234865==    by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==234865==    by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==234865==    by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==234865==    by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18)
==234865== 
==234865== Open file descriptor 8: /dev/shm/open_mpi.0000
==234865==    at 0x8144BCC: __open_nocancel (open64_nocancel.c:39)
==234865==    by 0x80C8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40)
==234865==    by 0x7987822: ???
==234865==    by 0x798796F: ???
==234865==    by 0xC0846DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xC084938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xC03A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==234865==    by 0xBFDF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==234865==    by 0x87C2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x875BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==234865==    by 0x66FDD38: PetscInitialize (pinit.c:924)
==234865==    by 0x65D5153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==234865==    by 0x65D51A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==234865==    by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==234865==    by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==234865==    by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==234865==    by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==234865==    by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==234865==    by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18)
==234865== 
==234865== Open file descriptor 109:
==234865==    <inherited from parent>
==234865== 
==234865== Open file descriptor 106:
==234865==    <inherited from parent>
==234865== 
==234865== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSpiralWaveAndPhase_valgrind.txt
==234865==    <inherited from parent>
==234865== 
==234865== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==234865==    <inherited from parent>
==234865== 
==234865== 
==234865== HEAP SUMMARY:
==234865==     in use at exit: 1,876,128 bytes in 11,744 blocks
==234865==   total heap usage: 4,359,987 allocs, 4,348,243 frees, 2,100,795,133 bytes allocated
==234865== 
==234865== LEAK SUMMARY:
==234865==    definitely lost: 0 bytes in 0 blocks
==234865==    indirectly lost: 0 bytes in 0 blocks
==234865==      possibly lost: 0 bytes in 0 blocks
==234865==    still reachable: 24 bytes in 2 blocks
==234865==         suppressed: 1,876,104 bytes in 11,742 blocks
==234865== Reachable blocks (those to which a pointer was found) are not shown.
==234865== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==234865== 
==234865== For lists of detected and suppressed errors, rerun with: -s
==234865== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 50)