==34658== Memcheck, a memory error detector ==34658== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==34658== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==34658== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==34658== Parent PID: 33132 ==34658== ==34658== ==34658== FILE DESCRIPTORS: 9 open (3 std) at exit. ==34658== Open file descriptor 12: ==34658== at 0xE86422D: pipe (pipe.c:29) ==34658== by 0x18AE307D: ??? ==34658== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34658== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34658== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34658== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34658== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34658== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34658== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34658== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34658== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34658== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34658== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34658== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==34658== ==34658== Open file descriptor 8: /dev/shm/open_mpi.0000 ==34658== at 0xE868BCC: __open_nocancel (open64_nocancel.c:39) ==34658== by 0xE7ECC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==34658== by 0xE49F822: ??? ==34658== by 0xE49F96F: ??? ==34658== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34658== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34658== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34658== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34658== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34658== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34658== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34658== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34658== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34658== by 0x1654C8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34658== by 0x15DB89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34658== by 0x160CF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34658== by 0x160B94: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34658== by 0x16122B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34658== by 0x15BFA5: main (TestCaBasedCellPopulation.cpp:19) ==34658== ==34658== Open file descriptor 109: ==34658== ==34658== ==34658== Open file descriptor 106: ==34658== ==34658== ==34658== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==34658== ==34658== ==34658== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==34658== ==34658== ==34658== ==34658== HEAP SUMMARY: ==34658== in use at exit: 858,014 bytes in 12,113 blocks ==34658== total heap usage: 83,507 allocs, 71,394 frees, 1,551,762,206 bytes allocated ==34658== ==34658== LEAK SUMMARY: ==34658== definitely lost: 0 bytes in 0 blocks ==34658== indirectly lost: 0 bytes in 0 blocks ==34658== possibly lost: 0 bytes in 0 blocks ==34658== still reachable: 56 bytes in 3 blocks ==34658== suppressed: 857,958 bytes in 12,110 blocks ==34658== Reachable blocks (those to which a pointer was found) are not shown. ==34658== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==34658== ==34658== For lists of detected and suppressed errors, rerun with: -s ==34658== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)