==34703== Memcheck, a memory error detector ==34703== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==34703== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==34703== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationCountWriters -malloc_debug -malloc_dump -memory_info ==34703== Parent PID: 33132 ==34703== ==34703== ==34703== FILE DESCRIPTORS: 9 open (3 std) at exit. ==34703== Open file descriptor 12: ==34703== at 0xE86422D: pipe (pipe.c:29) ==34703== by 0x18AE307D: ??? ==34703== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34703== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34703== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34703== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34703== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34703== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34703== by 0x136A2E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34703== by 0x12FEA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34703== by 0x1327EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34703== by 0x1326E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34703== by 0x132CFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34703== by 0x12E6A5: main (TestCellPopulationCountWriters.cpp:18) ==34703== ==34703== Open file descriptor 8: /dev/shm/open_mpi.0000 ==34703== at 0xE868BCC: __open_nocancel (open64_nocancel.c:39) ==34703== by 0xE7ECC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==34703== by 0xE49F822: ??? ==34703== by 0xE49F96F: ??? ==34703== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34703== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34703== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34703== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34703== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34703== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34703== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34703== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34703== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34703== by 0x136A2E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34703== by 0x12FEA3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34703== by 0x1327EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34703== by 0x1326E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34703== by 0x132CFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34703== by 0x12E6A5: main (TestCellPopulationCountWriters.cpp:18) ==34703== ==34703== Open file descriptor 109: ==34703== ==34703== ==34703== Open file descriptor 106: ==34703== ==34703== ==34703== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationCountWriters_valgrind.txt ==34703== ==34703== ==34703== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==34703== ==34703== ==34703== ==34703== HEAP SUMMARY: ==34703== in use at exit: 858,014 bytes in 12,113 blocks ==34703== total heap usage: 63,227 allocs, 51,114 frees, 1,545,182,528 bytes allocated ==34703== ==34703== LEAK SUMMARY: ==34703== definitely lost: 0 bytes in 0 blocks ==34703== indirectly lost: 0 bytes in 0 blocks ==34703== possibly lost: 0 bytes in 0 blocks ==34703== still reachable: 56 bytes in 3 blocks ==34703== suppressed: 857,958 bytes in 12,110 blocks ==34703== Reachable blocks (those to which a pointer was found) are not shown. ==34703== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==34703== ==34703== For lists of detected and suppressed errors, rerun with: -s ==34703== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)