==33135== Memcheck, a memory error detector ==33135== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==33135== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==33135== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==33135== Parent PID: 33132 ==33135== ==33135== ==33135== FILE DESCRIPTORS: 9 open (3 std) at exit. ==33135== Open file descriptor 12: ==33135== at 0x4CB122D: pipe (pipe.c:29) ==33135== by 0xAEA107D: ??? ==33135== by 0x89BA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==33135== by 0x626D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==33135== by 0x6206D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==33135== by 0x4EFDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==33135== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==33135== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==33135== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==33135== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==33135== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==33135== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==33135== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==33135== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==33135== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==33135== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==33135== by 0x110C15: main (TestCitations.cpp:18) ==33135== ==33135== Open file descriptor 8: /dev/shm/open_mpi.0000 ==33135== at 0x4CB5BCC: __open_nocancel (open64_nocancel.c:39) ==33135== by 0x4C39C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==33135== by 0x492E822: ??? ==33135== by 0x492E96F: ??? ==33135== by 0x8A5F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==33135== by 0x8A5F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==33135== by 0x8A15922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==33135== by 0x89BA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==33135== by 0x626D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==33135== by 0x6206D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==33135== by 0x4EFDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==33135== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==33135== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==33135== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==33135== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==33135== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==33135== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==33135== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==33135== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==33135== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==33135== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==33135== by 0x110C15: main (TestCitations.cpp:18) ==33135== ==33135== Open file descriptor 109: ==33135== ==33135== ==33135== Open file descriptor 106: ==33135== ==33135== ==33135== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==33135== ==33135== ==33135== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==33135== ==33135== ==33135== ==33135== HEAP SUMMARY: ==33135== in use at exit: 857,486 bytes in 12,112 blocks ==33135== total heap usage: 54,341 allocs, 42,229 frees, 1,542,864,012 bytes allocated ==33135== ==33135== LEAK SUMMARY: ==33135== definitely lost: 0 bytes in 0 blocks ==33135== indirectly lost: 0 bytes in 0 blocks ==33135== possibly lost: 0 bytes in 0 blocks ==33135== still reachable: 24 bytes in 2 blocks ==33135== suppressed: 857,462 bytes in 12,110 blocks ==33135== Reachable blocks (those to which a pointer was found) are not shown. ==33135== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==33135== ==33135== For lists of detected and suppressed errors, rerun with: -s ==33135== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 20 from 20)