==34771== Memcheck, a memory error detector ==34771== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==34771== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==34771== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==34771== Parent PID: 33132 ==34771== ==34771== ==34771== FILE DESCRIPTORS: 9 open (3 std) at exit. ==34771== Open file descriptor 12: ==34771== at 0xFCD722D: pipe (pipe.c:29) ==34771== by 0x18AE107D: ??? ==34771== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34771== by 0xF926418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34771== by 0xF8BFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34771== by 0xE593D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34771== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34771== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34771== by 0x12E99F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==34771== by 0x129A93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34771== by 0x12C240: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34771== by 0x12C13C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34771== by 0x12C74F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34771== by 0x128295: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==34771== ==34771== Open file descriptor 8: /dev/shm/open_mpi.0000 ==34771== at 0xFCDBBCC: __open_nocancel (open64_nocancel.c:39) ==34771== by 0xFC5FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==34771== by 0xF81D822: ??? ==34771== by 0xF81D96F: ??? ==34771== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34771== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34771== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34771== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34771== by 0xF926418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34771== by 0xF8BFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34771== by 0xE593D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34771== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34771== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34771== by 0x12E99F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==34771== by 0x129A93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34771== by 0x12C240: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34771== by 0x12C13C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34771== by 0x12C74F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34771== by 0x128295: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==34771== ==34771== Open file descriptor 109: ==34771== ==34771== ==34771== Open file descriptor 106: ==34771== ==34771== ==34771== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==34771== ==34771== ==34771== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==34771== ==34771== ==34771== ==34771== HEAP SUMMARY: ==34771== in use at exit: 858,014 bytes in 12,113 blocks ==34771== total heap usage: 68,913 allocs, 56,800 frees, 1,543,731,193 bytes allocated ==34771== ==34771== LEAK SUMMARY: ==34771== definitely lost: 0 bytes in 0 blocks ==34771== indirectly lost: 0 bytes in 0 blocks ==34771== possibly lost: 0 bytes in 0 blocks ==34771== still reachable: 56 bytes in 3 blocks ==34771== suppressed: 857,958 bytes in 12,110 blocks ==34771== Reachable blocks (those to which a pointer was found) are not shown. ==34771== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==34771== ==34771== For lists of detected and suppressed errors, rerun with: -s ==34771== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)