==41993== Memcheck, a memory error detector ==41993== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41993== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41993== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==41993== Parent PID: 33132 ==41993== ==41993== ==41993== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41993== Open file descriptor 12: ==41993== at 0xFF5422D: pipe (pipe.c:29) ==41993== by 0x1A7A307D: ??? ==41993== by 0x145384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41993== by 0xFBA1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41993== by 0xFB3AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41993== by 0xE831D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==41993== by 0xE6A4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41993== by 0xE6A41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41993== by 0x1925C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41993== by 0x18A5CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41993== by 0x18DB64: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41993== by 0x18DA04: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41993== by 0x18E09B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41993== by 0x186EF5: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==41993== ==41993== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41993== at 0xFF58BCC: __open_nocancel (open64_nocancel.c:39) ==41993== by 0xFEDCC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41993== by 0xE6D8822: ??? ==41993== by 0xE6D896F: ??? ==41993== by 0x145DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41993== by 0x145DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41993== by 0x14593922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41993== by 0x145382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41993== by 0xFBA1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41993== by 0xFB3AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41993== by 0xE831D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==41993== by 0xE6A4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41993== by 0xE6A41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41993== by 0x1925C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41993== by 0x18A5CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41993== by 0x18DB64: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41993== by 0x18DA04: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41993== by 0x18E09B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41993== by 0x186EF5: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==41993== ==41993== Open file descriptor 109: ==41993== ==41993== ==41993== Open file descriptor 106: ==41993== ==41993== ==41993== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==41993== ==41993== ==41993== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41993== ==41993== ==41993== ==41993== HEAP SUMMARY: ==41993== in use at exit: 858,094 bytes in 12,114 blocks ==41993== total heap usage: 870,115 allocs, 858,001 frees, 1,665,332,630 bytes allocated ==41993== ==41993== LEAK SUMMARY: ==41993== definitely lost: 0 bytes in 0 blocks ==41993== indirectly lost: 0 bytes in 0 blocks ==41993== possibly lost: 0 bytes in 0 blocks ==41993== still reachable: 120 bytes in 4 blocks ==41993== suppressed: 857,974 bytes in 12,110 blocks ==41993== Reachable blocks (those to which a pointer was found) are not shown. ==41993== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41993== ==41993== For lists of detected and suppressed errors, rerun with: -s ==41993== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)