==34946== Memcheck, a memory error detector ==34946== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==34946== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==34946== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==34946== Parent PID: 33132 ==34946== ==34946== ==34946== FILE DESCRIPTORS: 9 open (3 std) at exit. ==34946== Open file descriptor 12: ==34946== at 0xE90922D: pipe (pipe.c:29) ==34946== by 0x18AE307D: ??? ==34946== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34946== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34946== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34946== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34946== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34946== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34946== by 0x12415A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34946== by 0x11F553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34946== by 0x121A34: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34946== by 0x12192F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34946== by 0x121F43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34946== by 0x11DD55: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==34946== ==34946== Open file descriptor 8: /dev/shm/open_mpi.0000 ==34946== at 0xE90DBCC: __open_nocancel (open64_nocancel.c:39) ==34946== by 0xE891C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==34946== by 0xE49F822: ??? ==34946== by 0xE49F96F: ??? ==34946== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34946== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34946== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==34946== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==34946== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34946== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==34946== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==34946== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==34946== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==34946== by 0x12415A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==34946== by 0x11F553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==34946== by 0x121A34: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==34946== by 0x12192F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==34946== by 0x121F43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==34946== by 0x11DD55: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==34946== ==34946== Open file descriptor 109: ==34946== ==34946== ==34946== Open file descriptor 106: ==34946== ==34946== ==34946== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==34946== ==34946== ==34946== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==34946== ==34946== ==34946== ==34946== HEAP SUMMARY: ==34946== in use at exit: 857,957 bytes in 12,109 blocks ==34946== total heap usage: 3,328,952 allocs, 3,316,843 frees, 4,656,780,834 bytes allocated ==34946== ==34946== LEAK SUMMARY: ==34946== definitely lost: 0 bytes in 0 blocks ==34946== indirectly lost: 0 bytes in 0 blocks ==34946== possibly lost: 0 bytes in 0 blocks ==34946== still reachable: 56 bytes in 3 blocks ==34946== suppressed: 857,901 bytes in 12,106 blocks ==34946== Reachable blocks (those to which a pointer was found) are not shown. ==34946== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==34946== ==34946== For lists of detected and suppressed errors, rerun with: -s ==34946== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)