==41903== Memcheck, a memory error detector ==41903== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41903== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41903== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==41903== Parent PID: 33132 ==41903== ==41903== ==41903== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41903== Open file descriptor 12: ==41903== at 0xCF5922D: pipe (pipe.c:29) ==41903== by 0x18AE407D: ??? ==41903== by 0x140814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41903== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41903== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41903== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==41903== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41903== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41903== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41903== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41903== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41903== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41903== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41903== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==41903== ==41903== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41903== at 0xCF5DBCC: __open_nocancel (open64_nocancel.c:39) ==41903== by 0xCEE1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41903== by 0xCBD4822: ??? ==41903== by 0xCBD496F: ??? ==41903== by 0x141266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41903== by 0x14126938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41903== by 0x140DC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41903== by 0x140812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41903== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41903== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41903== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==41903== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41903== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41903== by 0x124670: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41903== by 0x11FBED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41903== by 0x1221AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41903== by 0x12204A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41903== by 0x1226E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41903== by 0x11E015: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==41903== ==41903== Open file descriptor 109: ==41903== ==41903== ==41903== Open file descriptor 106: ==41903== ==41903== ==41903== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==41903== ==41903== ==41903== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41903== ==41903== ==41903== ==41903== HEAP SUMMARY: ==41903== in use at exit: 857,957 bytes in 12,109 blocks ==41903== total heap usage: 37,226,987 allocs, 37,214,878 frees, 3,889,651,596 bytes allocated ==41903== ==41903== LEAK SUMMARY: ==41903== definitely lost: 0 bytes in 0 blocks ==41903== indirectly lost: 0 bytes in 0 blocks ==41903== possibly lost: 0 bytes in 0 blocks ==41903== still reachable: 56 bytes in 3 blocks ==41903== suppressed: 857,901 bytes in 12,106 blocks ==41903== Reachable blocks (those to which a pointer was found) are not shown. ==41903== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41903== ==41903== For lists of detected and suppressed errors, rerun with: -s ==41903== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)