==425567== Memcheck, a memory error detector
==425567== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==425567== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==425567== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayRemesher -malloc_debug -malloc_dump -memory_info
==425567== Parent PID: 409122
==425567== 
==425567== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints.
==425567==    This could cause spurious value errors to appear.
==425567==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==425567== Warning: noted but unhandled ioctl 0x27 with no size/direction hints.
==425567==    This could cause spurious value errors to appear.
==425567==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==425567== Warning: noted but unhandled ioctl 0x25 with no size/direction hints.
==425567==    This could cause spurious value errors to appear.
==425567==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==425567== Warning: noted but unhandled ioctl 0x17 with no size/direction hints.
==425567==    This could cause spurious value errors to appear.
==425567==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==425567== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess)
==425567== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess)
==425567== Warning: set address range perms: large range [0x13d1f000, 0x33d1e000) (noaccess)
==425567== 
==425567== FILE DESCRIPTORS: 14 open (3 std) at exit.
==425567== Open file descriptor 23: /dev/nvidia0
==425567==    at 0x8227764: open (open64.c:41)
==425567==    by 0x12DCB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12DCD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12E66B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12D54026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12D5D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12DD5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12E5FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12C1A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12B648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0xBA8D023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0xBA8DFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0x107AD46A: ???
==425567==    by 0xC0DEF05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC0BAB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC06BCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xBF98EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x1079BF03: ???
==425567==    by 0xBFCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x7B30418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x7AC9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x6795D38: PetscInitialize (pinit.c:924)
==425567==    by 0x666C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==425567==    by 0x666C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==425567==    by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==425567==    by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==425567==    by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==425567==    by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==425567==    by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==425567==    by 0x114955: main (TestAirwayRemesher.cpp:18)
==425567== 
==425567== Open file descriptor 22: /dev/nvidia0
==425567==    at 0x8227764: open (open64.c:41)
==425567==    by 0x12DCB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12DCD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12D5407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12D5D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12DD5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12E5FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12C1A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12B648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0xBA8D023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0xBA8DFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0x107AD46A: ???
==425567==    by 0xC0DEF05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC0BAB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC06BCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xBF98EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x1079BF03: ???
==425567==    by 0xBFCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x7B30418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x7AC9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x6795D38: PetscInitialize (pinit.c:924)
==425567==    by 0x666C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==425567==    by 0x666C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==425567==    by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==425567==    by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==425567==    by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==425567==    by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==425567==    by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==425567==    by 0x114955: main (TestAirwayRemesher.cpp:18)
==425567== 
==425567== Open file descriptor 21: /dev/nvidia0
==425567==    at 0x8227764: open (open64.c:41)
==425567==    by 0x12DCB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12DCC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12D5DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12DD54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12E5FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12C1A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12B648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0xBA8D023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0xBA8DFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0x107AD46A: ???
==425567==    by 0xC0DEF05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC0BAB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC06BCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xBF98EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x1079BF03: ???
==425567==    by 0xBFCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x7B30418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x7AC9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x6795D38: PetscInitialize (pinit.c:924)
==425567==    by 0x666C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==425567==    by 0x666C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==425567==    by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==425567==    by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==425567==    by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==425567==    by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==425567==    by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==425567==    by 0x114955: main (TestAirwayRemesher.cpp:18)
==425567== 
==425567== Open file descriptor 20: /dev/nvidia-uvm
==425567==    at 0x8227764: open (open64.c:41)
==425567==    by 0x12C36F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12C1A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12B648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0xBA8D023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0xBA8DFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0x107AD46A: ???
==425567==    by 0xC0DEF05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC0BAB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC06BCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xBF98EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x1079BF03: ???
==425567==    by 0xBFCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x7B30418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x7AC9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x6795D38: PetscInitialize (pinit.c:924)
==425567==    by 0x666C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==425567==    by 0x666C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==425567==    by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==425567==    by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==425567==    by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==425567==    by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==425567==    by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==425567==    by 0x114955: main (TestAirwayRemesher.cpp:18)
==425567== 
==425567== Open file descriptor 19: /dev/nvidiactl
==425567==    at 0x8227764: open (open64.c:41)
==425567==    by 0x12DCB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12DD08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12C1A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0x12B648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==425567==    by 0xBA8D023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0xBA8DFEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==425567==    by 0x107AD46A: ???
==425567==    by 0xC0DEF05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC0BAB30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==425567==    by 0xC06BCB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xBF98EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x1079BF03: ???
==425567==    by 0xBFCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x7B30418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x7AC9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x6795D38: PetscInitialize (pinit.c:924)
==425567==    by 0x666C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==425567==    by 0x666C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==425567==    by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==425567==    by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==425567==    by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==425567==    by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==425567==    by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==425567==    by 0x114955: main (TestAirwayRemesher.cpp:18)
==425567== 
==425567== Open file descriptor 12:
==425567==    at 0x822822D: pipe (pipe.c:29)
==425567==    by 0x1079B07D: ???
==425567==    by 0xBFCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x7B30418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x7AC9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x6795D38: PetscInitialize (pinit.c:924)
==425567==    by 0x666C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==425567==    by 0x666C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==425567==    by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==425567==    by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==425567==    by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==425567==    by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==425567==    by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==425567==    by 0x114955: main (TestAirwayRemesher.cpp:18)
==425567== 
==425567== Open file descriptor 8: /dev/shm/open_mpi.0000
==425567==    at 0x822CBCC: __open_nocancel (open64_nocancel.c:39)
==425567==    by 0x81B0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40)
==425567==    by 0x7A1F822: ???
==425567==    by 0x7A1F96F: ???
==425567==    by 0xC0726DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xC072938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xC028922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==425567==    by 0xBFCD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==425567==    by 0x7B30418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x7AC9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==425567==    by 0x6795D38: PetscInitialize (pinit.c:924)
==425567==    by 0x666C2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==425567==    by 0x666C32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==425567==    by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70)
==425567==    by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==425567==    by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==425567==    by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==425567==    by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==425567==    by 0x114955: main (TestAirwayRemesher.cpp:18)
==425567== 
==425567== Open file descriptor 116:
==425567==    <inherited from parent>
==425567== 
==425567== Open file descriptor 113:
==425567==    <inherited from parent>
==425567== 
==425567== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayRemesher_valgrind.txt
==425567==    <inherited from parent>
==425567== 
==425567== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==425567==    <inherited from parent>
==425567== 
==425567== 
==425567== HEAP SUMMARY:
==425567==     in use at exit: 1,875,675 bytes in 11,734 blocks
==425567==   total heap usage: 11,605,592 allocs, 11,593,858 frees, 1,992,152,151 bytes allocated
==425567== 
==425567== LEAK SUMMARY:
==425567==    definitely lost: 0 bytes in 0 blocks
==425567==    indirectly lost: 0 bytes in 0 blocks
==425567==      possibly lost: 0 bytes in 0 blocks
==425567==    still reachable: 24 bytes in 2 blocks
==425567==         suppressed: 1,875,651 bytes in 11,732 blocks
==425567== Reachable blocks (those to which a pointer was found) are not shown.
==425567== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==425567== 
==425567== For lists of detected and suppressed errors, rerun with: -s
==425567== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 49 from 49)