==62544== Memcheck, a memory error detector ==62544== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==62544== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==62544== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==62544== Parent PID: 60806 ==62544== ==62544== ==62544== FILE DESCRIPTORS: 9 open (3 std) at exit. ==62544== Open file descriptor 12: ==62544== at 0xECA122D: pipe (pipe.c:29) ==62544== by 0x18A1D07D: ??? ==62544== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==62544== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==62544== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==62544== by 0xF58DD38: PetscInitialize (pinit.c:924) ==62544== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==62544== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==62544== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==62544== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==62544== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==62544== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==62544== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==62544== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==62544== ==62544== Open file descriptor 8: /dev/shm/open_mpi.0000 ==62544== at 0xECA5BCC: __open_nocancel (open64_nocancel.c:39) ==62544== by 0xEC29C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==62544== by 0xE4A9822: ??? ==62544== by 0xE4A996F: ??? ==62544== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==62544== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==62544== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==62544== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==62544== by 0x108FD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==62544== by 0x10896D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==62544== by 0xF58DD38: PetscInitialize (pinit.c:924) ==62544== by 0xE46F153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==62544== by 0xE46F1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==62544== by 0x2E2C1E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==62544== by 0x2D9419: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==62544== by 0x2DDDE4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==62544== by 0x2DDC84: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==62544== by 0x2DE31B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==62544== by 0x2D7835: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==62544== ==62544== Open file descriptor 115: ==62544== ==62544== ==62544== Open file descriptor 112: ==62544== ==62544== ==62544== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==62544== ==62544== ==62544== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==62544== ==62544== ==62544== ==62544== HEAP SUMMARY: ==62544== in use at exit: 835,623 bytes in 11,677 blocks ==62544== total heap usage: 111,418 allocs, 99,741 frees, 1,547,906,678 bytes allocated ==62544== ==62544== LEAK SUMMARY: ==62544== definitely lost: 0 bytes in 0 blocks ==62544== indirectly lost: 0 bytes in 0 blocks ==62544== possibly lost: 0 bytes in 0 blocks ==62544== still reachable: 56 bytes in 3 blocks ==62544== suppressed: 835,567 bytes in 11,674 blocks ==62544== Reachable blocks (those to which a pointer was found) are not shown. ==62544== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==62544== ==62544== For lists of detected and suppressed errors, rerun with: -s ==62544== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)