==163516== Memcheck, a memory error detector ==163516== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163516== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163516== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==163516== Parent PID: 162002 ==163516== ==163516== ==163516== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163516== Open file descriptor 12: ==163516== at 0xCF9B22D: pipe (pipe.c:29) ==163516== by 0x18AE407D: ??? ==163516== by 0x140814CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163516== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163516== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163516== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163516== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163516== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163516== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163516== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163516== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163516== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163516== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163516== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==163516== ==163516== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163516== at 0xCF9FBCC: __open_nocancel (open64_nocancel.c:39) ==163516== by 0xCF23C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163516== by 0xCBD4822: ??? ==163516== by 0xCBD496F: ??? ==163516== by 0x141266DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163516== by 0x14126938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163516== by 0x140DC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163516== by 0x140812DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163516== by 0x104C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163516== by 0x1045AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163516== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163516== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163516== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163516== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163516== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163516== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163516== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163516== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163516== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==163516== ==163516== Open file descriptor 117: ==163516== ==163516== ==163516== Open file descriptor 115: ==163516== ==163516== ==163516== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==163516== ==163516== ==163516== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163516== ==163516== ==163516== ==163516== HEAP SUMMARY: ==163516== in use at exit: 858,019 bytes in 12,113 blocks ==163516== total heap usage: 63,845 allocs, 51,732 frees, 1,543,603,912 bytes allocated ==163516== ==163516== LEAK SUMMARY: ==163516== definitely lost: 0 bytes in 0 blocks ==163516== indirectly lost: 0 bytes in 0 blocks ==163516== possibly lost: 0 bytes in 0 blocks ==163516== still reachable: 56 bytes in 3 blocks ==163516== suppressed: 857,963 bytes in 12,110 blocks ==163516== Reachable blocks (those to which a pointer was found) are not shown. ==163516== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163516== ==163516== For lists of detected and suppressed errors, rerun with: -s ==163516== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)