==169781== Memcheck, a memory error detector ==169781== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==169781== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==169781== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==169781== Parent PID: 162002 ==169781== ==169781== ==169781== FILE DESCRIPTORS: 9 open (3 std) at exit. ==169781== Open file descriptor 12: ==169781== at 0xFD1B22D: pipe (pipe.c:29) ==169781== by 0x18AE107D: ??? ==169781== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==169781== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==169781== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==169781== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==169781== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==169781== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==169781== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==169781== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==169781== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==169781== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==169781== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==169781== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==169781== ==169781== Open file descriptor 8: /dev/shm/open_mpi.0000 ==169781== at 0xFD1FBCC: __open_nocancel (open64_nocancel.c:39) ==169781== by 0xFCA3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==169781== by 0xE49F822: ??? ==169781== by 0xE49F96F: ??? ==169781== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==169781== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==169781== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==169781== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==169781== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==169781== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==169781== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==169781== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==169781== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==169781== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==169781== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==169781== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==169781== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==169781== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==169781== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==169781== ==169781== Open file descriptor 117: ==169781== ==169781== ==169781== Open file descriptor 115: ==169781== ==169781== ==169781== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==169781== ==169781== ==169781== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==169781== ==169781== ==169781== ==169781== HEAP SUMMARY: ==169781== in use at exit: 858,019 bytes in 12,113 blocks ==169781== total heap usage: 500,106 allocs, 487,993 frees, 1,854,123,806 bytes allocated ==169781== ==169781== LEAK SUMMARY: ==169781== definitely lost: 0 bytes in 0 blocks ==169781== indirectly lost: 0 bytes in 0 blocks ==169781== possibly lost: 0 bytes in 0 blocks ==169781== still reachable: 56 bytes in 3 blocks ==169781== suppressed: 857,963 bytes in 12,110 blocks ==169781== Reachable blocks (those to which a pointer was found) are not shown. ==169781== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==169781== ==169781== For lists of detected and suppressed errors, rerun with: -s ==169781== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)