==170470== Memcheck, a memory error detector ==170470== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==170470== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==170470== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==170470== Parent PID: 162002 ==170470== ==170470== ==170470== FILE DESCRIPTORS: 9 open (3 std) at exit. ==170470== Open file descriptor 12: ==170470== at 0xFD1B22D: pipe (pipe.c:29) ==170470== by 0x18AE107D: ??? ==170470== by 0x1402F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==170470== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170470== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170470== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==170470== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==170470== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==170470== by 0x1498E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==170470== by 0x144299: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==170470== by 0x146F2E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==170470== by 0x146DCE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==170470== by 0x147465: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==170470== by 0x1426B5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==170470== ==170470== Open file descriptor 8: /dev/shm/open_mpi.0000 ==170470== at 0xFD1FBCC: __open_nocancel (open64_nocancel.c:39) ==170470== by 0xFCA3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==170470== by 0xE49F822: ??? ==170470== by 0xE49F96F: ??? ==170470== by 0x140D46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==170470== by 0x140D4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==170470== by 0x1408A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==170470== by 0x1402F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==170470== by 0xF968418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170470== by 0xF901D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170470== by 0xE5F8D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==170470== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==170470== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==170470== by 0x1498E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==170470== by 0x144299: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==170470== by 0x146F2E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==170470== by 0x146DCE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==170470== by 0x147465: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==170470== by 0x1426B5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==170470== ==170470== Open file descriptor 117: ==170470== ==170470== ==170470== Open file descriptor 115: ==170470== ==170470== ==170470== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==170470== ==170470== ==170470== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==170470== ==170470== ==170470== ==170470== HEAP SUMMARY: ==170470== in use at exit: 857,959 bytes in 12,109 blocks ==170470== total heap usage: 4,271,133 allocs, 4,259,024 frees, 2,102,989,371 bytes allocated ==170470== ==170470== LEAK SUMMARY: ==170470== definitely lost: 0 bytes in 0 blocks ==170470== indirectly lost: 0 bytes in 0 blocks ==170470== possibly lost: 0 bytes in 0 blocks ==170470== still reachable: 56 bytes in 3 blocks ==170470== suppressed: 857,903 bytes in 12,106 blocks ==170470== Reachable blocks (those to which a pointer was found) are not shown. ==170470== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==170470== ==170470== For lists of detected and suppressed errors, rerun with: -s ==170470== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)