==163852== Memcheck, a memory error detector ==163852== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163852== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163852== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==163852== Parent PID: 162002 ==163852== ==163852== ==163852== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163852== Open file descriptor 12: ==163852== at 0xE94B22D: pipe (pipe.c:29) ==163852== by 0x18AE307D: ??? ==163852== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163852== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163852== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163852== by 0xF236D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163852== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163852== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163852== by 0x2135CC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163852== by 0x20ADD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163852== by 0x20E9C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163852== by 0x20E864: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163852== by 0x20EEFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163852== by 0x2091F5: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==163852== ==163852== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163852== at 0xE94FBCC: __open_nocancel (open64_nocancel.c:39) ==163852== by 0xE8D3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163852== by 0xE49F822: ??? ==163852== by 0xE49F96F: ??? ==163852== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163852== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163852== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163852== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163852== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163852== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163852== by 0xF236D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163852== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163852== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163852== by 0x2135CC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163852== by 0x20ADD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163852== by 0x20E9C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163852== by 0x20E864: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163852== by 0x20EEFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163852== by 0x2091F5: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==163852== ==163852== Open file descriptor 117: ==163852== ==163852== ==163852== Open file descriptor 115: ==163852== ==163852== ==163852== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==163852== ==163852== ==163852== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163852== ==163852== ==163852== ==163852== HEAP SUMMARY: ==163852== in use at exit: 857,991 bytes in 12,110 blocks ==163852== total heap usage: 16,534,187 allocs, 16,522,077 frees, 30,121,277,977 bytes allocated ==163852== ==163852== LEAK SUMMARY: ==163852== definitely lost: 0 bytes in 0 blocks ==163852== indirectly lost: 0 bytes in 0 blocks ==163852== possibly lost: 0 bytes in 0 blocks ==163852== still reachable: 88 bytes in 4 blocks ==163852== suppressed: 857,903 bytes in 12,106 blocks ==163852== Reachable blocks (those to which a pointer was found) are not shown. ==163852== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163852== ==163852== For lists of detected and suppressed errors, rerun with: -s ==163852== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)