==163676== Memcheck, a memory error detector ==163676== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163676== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163676== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==163676== Parent PID: 162002 ==163676== ==163676== ==163676== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163676== Open file descriptor 12: ==163676== at 0xE90922D: pipe (pipe.c:29) ==163676== by 0x18AE307D: ??? ==163676== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163676== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163676== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163676== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163676== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163676== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163676== by 0x12B416: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163676== by 0x126673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163676== by 0x128C1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163676== by 0x128B16: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163676== by 0x129129: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163676== by 0x124E75: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==163676== ==163676== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163676== at 0xE90DBCC: __open_nocancel (open64_nocancel.c:39) ==163676== by 0xE891C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163676== by 0xE49F822: ??? ==163676== by 0xE49F96F: ??? ==163676== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163676== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163676== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163676== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163676== by 0x105A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163676== by 0x10541D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163676== by 0xF238D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163676== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163676== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163676== by 0x12B416: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==163676== by 0x126673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163676== by 0x128C1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163676== by 0x128B16: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163676== by 0x129129: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163676== by 0x124E75: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==163676== ==163676== Open file descriptor 117: ==163676== ==163676== ==163676== Open file descriptor 115: ==163676== ==163676== ==163676== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==163676== ==163676== ==163676== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163676== ==163676== ==163676== ==163676== HEAP SUMMARY: ==163676== in use at exit: 858,019 bytes in 12,113 blocks ==163676== total heap usage: 61,180 allocs, 49,067 frees, 1,543,322,759 bytes allocated ==163676== ==163676== LEAK SUMMARY: ==163676== definitely lost: 0 bytes in 0 blocks ==163676== indirectly lost: 0 bytes in 0 blocks ==163676== possibly lost: 0 bytes in 0 blocks ==163676== still reachable: 56 bytes in 3 blocks ==163676== suppressed: 857,963 bytes in 12,110 blocks ==163676== Reachable blocks (those to which a pointer was found) are not shown. ==163676== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163676== ==163676== For lists of detected and suppressed errors, rerun with: -s ==163676== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)