==163693== Memcheck, a memory error detector ==163693== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==163693== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==163693== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==163693== Parent PID: 162002 ==163693== ==163693== ==163693== FILE DESCRIPTORS: 9 open (3 std) at exit. ==163693== Open file descriptor 12: ==163693== at 0xE45022D: pipe (pipe.c:29) ==163693== by 0x18AE307D: ??? ==163693== by 0x12C284CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163693== by 0xE09F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163693== by 0xE038D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163693== by 0xCD2FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163693== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163693== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163693== by 0x132BB1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==163693== by 0x12B8FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163693== by 0x12E61A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163693== by 0x12E4BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163693== by 0x12EB51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163693== by 0x129D25: main (TestPottsUpdateRules.cpp:19) ==163693== ==163693== Open file descriptor 8: /dev/shm/open_mpi.0000 ==163693== at 0xE454BCC: __open_nocancel (open64_nocancel.c:39) ==163693== by 0xE3D8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==163693== by 0xCBD4822: ??? ==163693== by 0xCBD496F: ??? ==163693== by 0x12CCD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163693== by 0x12CCD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163693== by 0x12C83922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==163693== by 0x12C282DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==163693== by 0xE09F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163693== by 0xE038D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==163693== by 0xCD2FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==163693== by 0xCBA0153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==163693== by 0xCBA01A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==163693== by 0x132BB1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==163693== by 0x12B8FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==163693== by 0x12E61A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==163693== by 0x12E4BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==163693== by 0x12EB51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==163693== by 0x129D25: main (TestPottsUpdateRules.cpp:19) ==163693== ==163693== Open file descriptor 117: ==163693== ==163693== ==163693== Open file descriptor 115: ==163693== ==163693== ==163693== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==163693== ==163693== ==163693== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==163693== ==163693== ==163693== ==163693== HEAP SUMMARY: ==163693== in use at exit: 858,019 bytes in 12,113 blocks ==163693== total heap usage: 75,623 allocs, 63,510 frees, 1,544,398,244 bytes allocated ==163693== ==163693== LEAK SUMMARY: ==163693== definitely lost: 0 bytes in 0 blocks ==163693== indirectly lost: 0 bytes in 0 blocks ==163693== possibly lost: 0 bytes in 0 blocks ==163693== still reachable: 56 bytes in 3 blocks ==163693== suppressed: 857,963 bytes in 12,110 blocks ==163693== Reachable blocks (those to which a pointer was found) are not shown. ==163693== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==163693== ==163693== For lists of detected and suppressed errors, rerun with: -s ==163693== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)