==170828== Memcheck, a memory error detector ==170828== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==170828== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==170828== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==170828== Parent PID: 162002 ==170828== ==170828== ==170828== FILE DESCRIPTORS: 9 open (3 std) at exit. ==170828== Open file descriptor 12: ==170828== at 0xFD1122D: pipe (pipe.c:29) ==170828== by 0x1A7A307D: ??? ==170828== by 0x144E74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==170828== by 0xF95E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170828== by 0xF8F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170828== by 0xE5EED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==170828== by 0xE461153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==170828== by 0xE4611A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==170828== by 0x186C33: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==170828== by 0x17F28B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==170828== by 0x1824EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==170828== by 0x18238A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==170828== by 0x182A21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==170828== by 0x17BBB5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==170828== ==170828== Open file descriptor 8: /dev/shm/open_mpi.0000 ==170828== at 0xFD15BCC: __open_nocancel (open64_nocancel.c:39) ==170828== by 0xFC99C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==170828== by 0xE495822: ??? ==170828== by 0xE49596F: ??? ==170828== by 0x1458C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==170828== by 0x1458C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==170828== by 0x14542922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==170828== by 0x144E72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==170828== by 0xF95E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170828== by 0xF8F7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==170828== by 0xE5EED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==170828== by 0xE461153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==170828== by 0xE4611A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==170828== by 0x186C33: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==170828== by 0x17F28B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==170828== by 0x1824EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==170828== by 0x18238A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==170828== by 0x182A21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==170828== by 0x17BBB5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==170828== ==170828== Open file descriptor 117: ==170828== ==170828== ==170828== Open file descriptor 115: ==170828== ==170828== ==170828== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==170828== ==170828== ==170828== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==170828== ==170828== ==170828== ==170828== HEAP SUMMARY: ==170828== in use at exit: 858,099 bytes in 12,114 blocks ==170828== total heap usage: 761,880 allocs, 749,766 frees, 1,577,027,483 bytes allocated ==170828== ==170828== LEAK SUMMARY: ==170828== definitely lost: 0 bytes in 0 blocks ==170828== indirectly lost: 0 bytes in 0 blocks ==170828== possibly lost: 0 bytes in 0 blocks ==170828== still reachable: 120 bytes in 4 blocks ==170828== suppressed: 857,979 bytes in 12,110 blocks ==170828== Reachable blocks (those to which a pointer was found) are not shown. ==170828== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==170828== ==170828== For lists of detected and suppressed errors, rerun with: -s ==170828== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 24 from 24)