==186498== Memcheck, a memory error detector ==186498== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==186498== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==186498== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==186498== Parent PID: 184752 ==186498== ==186498== ==186498== FILE DESCRIPTORS: 9 open (3 std) at exit. ==186498== Open file descriptor 12: ==186498== at 0xE82222D: pipe (pipe.c:29) ==186498== by 0x18AE307D: ??? ==186498== by 0x140804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==186498== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==186498== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==186498== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==186498== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==186498== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==186498== by 0x12211E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==186498== by 0x11D8CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==186498== by 0x11FC58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==186498== by 0x11FAF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==186498== by 0x12018F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==186498== by 0x11BCF5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==186498== ==186498== Open file descriptor 8: /dev/shm/open_mpi.0000 ==186498== at 0xE826BCC: __open_nocancel (open64_nocancel.c:39) ==186498== by 0xE7AAC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==186498== by 0xE49F822: ??? ==186498== by 0xE49F96F: ??? ==186498== by 0x141256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==186498== by 0x14125938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==186498== by 0x140DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==186498== by 0x140802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==186498== by 0x104BF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==186498== by 0x10458D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==186498== by 0xF14FD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==186498== by 0xE46B153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==186498== by 0xE46B1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==186498== by 0x12211E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==186498== by 0x11D8CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==186498== by 0x11FC58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==186498== by 0x11FAF8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==186498== by 0x12018F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==186498== by 0x11BCF5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==186498== ==186498== Open file descriptor 116: ==186498== ==186498== ==186498== Open file descriptor 113: ==186498== ==186498== ==186498== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==186498== ==186498== ==186498== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==186498== ==186498== ==186498== ==186498== HEAP SUMMARY: ==186498== in use at exit: 858,019 bytes in 12,113 blocks ==186498== total heap usage: 1,078,168 allocs, 1,066,055 frees, 1,618,000,102 bytes allocated ==186498== ==186498== LEAK SUMMARY: ==186498== definitely lost: 0 bytes in 0 blocks ==186498== indirectly lost: 0 bytes in 0 blocks ==186498== possibly lost: 0 bytes in 0 blocks ==186498== still reachable: 56 bytes in 3 blocks ==186498== suppressed: 857,963 bytes in 12,110 blocks ==186498== Reachable blocks (those to which a pointer was found) are not shown. ==186498== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==186498== ==186498== For lists of detected and suppressed errors, rerun with: -s ==186498== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)