==547538== Memcheck, a memory error detector
==547538== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==547538== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==547538== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainTissue -malloc_debug -malloc_dump -memory_info
==547538== Parent PID: 531165
==547538== 
==547538== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints.
==547538==    This could cause spurious value errors to appear.
==547538==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547538== Warning: noted but unhandled ioctl 0x27 with no size/direction hints.
==547538==    This could cause spurious value errors to appear.
==547538==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547538== Warning: noted but unhandled ioctl 0x25 with no size/direction hints.
==547538==    This could cause spurious value errors to appear.
==547538==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547538== Warning: noted but unhandled ioctl 0x17 with no size/direction hints.
==547538==    This could cause spurious value errors to appear.
==547538==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547538== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess)
==547538== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess)
==547538== Warning: set address range perms: large range [0x1732e000, 0x3732d000) (noaccess)
==547538== 
==547538== FILE DESCRIPTORS: 14 open (3 std) at exit.
==547538== Open file descriptor 23: /dev/nvidia0
==547538==    at 0xB8167A4: open (open64.c:41)
==547538==    by 0x163CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x163CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x16466B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x16354026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1635D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x163D5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1645FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1621A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0xF219023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0xF219FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0x13FA646A: ???
==547538==    by 0xF8B7F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF893B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF844CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF771EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0x13F94F03: ???
==547538==    by 0xF7A64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0xBB93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0xBB2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0x9ECCD38: PetscInitialize (pinit.c:924)
==547538==    by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547538==    by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547538==    by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547538==    by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547538==    by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547538==    by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547538==    by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547538==    by 0x1326C5: main (TestBidomainTissue.cpp:18)
==547538== 
==547538== Open file descriptor 22: /dev/nvidia0
==547538==    at 0xB8167A4: open (open64.c:41)
==547538==    by 0x163CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x163CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1635407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1635D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x163D5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1645FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1621A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0xF219023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0xF219FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0x13FA646A: ???
==547538==    by 0xF8B7F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF893B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF844CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF771EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0x13F94F03: ???
==547538==    by 0xF7A64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0xBB93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0xBB2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0x9ECCD38: PetscInitialize (pinit.c:924)
==547538==    by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547538==    by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547538==    by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547538==    by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547538==    by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547538==    by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547538==    by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547538==    by 0x1326C5: main (TestBidomainTissue.cpp:18)
==547538== 
==547538== Open file descriptor 21: /dev/nvidia0
==547538==    at 0xB8167A4: open (open64.c:41)
==547538==    by 0x163CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x163CC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1635DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x163D54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1645FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1621A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0xF219023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0xF219FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0x13FA646A: ???
==547538==    by 0xF8B7F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF893B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF844CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF771EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0x13F94F03: ???
==547538==    by 0xF7A64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0xBB93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0xBB2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0x9ECCD38: PetscInitialize (pinit.c:924)
==547538==    by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547538==    by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547538==    by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547538==    by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547538==    by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547538==    by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547538==    by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547538==    by 0x1326C5: main (TestBidomainTissue.cpp:18)
==547538== 
==547538== Open file descriptor 20: /dev/nvidia-uvm
==547538==    at 0xB8167A4: open (open64.c:41)
==547538==    by 0x16236F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1621A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0xF219023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0xF219FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0x13FA646A: ???
==547538==    by 0xF8B7F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF893B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF844CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF771EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0x13F94F03: ???
==547538==    by 0xF7A64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0xBB93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0xBB2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0x9ECCD38: PetscInitialize (pinit.c:924)
==547538==    by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547538==    by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547538==    by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547538==    by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547538==    by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547538==    by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547538==    by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547538==    by 0x1326C5: main (TestBidomainTissue.cpp:18)
==547538== 
==547538== Open file descriptor 19: /dev/nvidiactl
==547538==    at 0xB8167A4: open (open64.c:41)
==547538==    by 0x163CB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x163D08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x1621A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547538==    by 0xF219023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0xF219FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547538==    by 0x13FA646A: ???
==547538==    by 0xF8B7F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF893B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547538==    by 0xF844CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF771EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0x13F94F03: ???
==547538==    by 0xF7A64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0xBB93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0xBB2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0x9ECCD38: PetscInitialize (pinit.c:924)
==547538==    by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547538==    by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547538==    by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547538==    by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547538==    by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547538==    by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547538==    by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547538==    by 0x1326C5: main (TestBidomainTissue.cpp:18)
==547538== 
==547538== Open file descriptor 12:
==547538==    at 0xB81726D: pipe (pipe.c:29)
==547538==    by 0x13F9407D: ???
==547538==    by 0xF7A64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0xBB93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0xBB2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0x9ECCD38: PetscInitialize (pinit.c:924)
==547538==    by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547538==    by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547538==    by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547538==    by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547538==    by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547538==    by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547538==    by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547538==    by 0x1326C5: main (TestBidomainTissue.cpp:18)
==547538== 
==547538== Open file descriptor 8: /dev/shm/open_mpi.0000
==547538==    at 0xB81BC0C: __open_nocancel (open64_nocancel.c:39)
==547538==    by 0xB79FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40)
==547538==    by 0x9D6B822: ???
==547538==    by 0x9D6B96F: ???
==547538==    by 0xF84B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF84B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF801922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547538==    by 0xF7A62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547538==    by 0xBB93418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0xBB2CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547538==    by 0x9ECCD38: PetscInitialize (pinit.c:924)
==547538==    by 0x9D37153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547538==    by 0x9D371A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547538==    by 0x1397A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547538==    by 0x133EC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547538==    by 0x136612: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547538==    by 0x13650E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547538==    by 0x136B21: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547538==    by 0x1326C5: main (TestBidomainTissue.cpp:18)
==547538== 
==547538== Open file descriptor 115:
==547538==    <inherited from parent>
==547538== 
==547538== Open file descriptor 112:
==547538==    <inherited from parent>
==547538== 
==547538== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainTissue_valgrind.txt
==547538==    <inherited from parent>
==547538== 
==547538== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==547538==    <inherited from parent>
==547538== 
==547538== 
==547538== HEAP SUMMARY:
==547538==     in use at exit: 1,875,894 bytes in 11,738 blocks
==547538==   total heap usage: 200,454 allocs, 188,716 frees, 1,575,822,928 bytes allocated
==547538== 
==547538== LEAK SUMMARY:
==547538==    definitely lost: 0 bytes in 0 blocks
==547538==    indirectly lost: 0 bytes in 0 blocks
==547538==      possibly lost: 0 bytes in 0 blocks
==547538==    still reachable: 24 bytes in 2 blocks
==547538==         suppressed: 1,875,870 bytes in 11,736 blocks
==547538== Reachable blocks (those to which a pointer was found) are not shown.
==547538== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==547538== 
==547538== For lists of detected and suppressed errors, rerun with: -s
==547538== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 51 from 51)