==547677== Memcheck, a memory error detector
==547677== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==547677== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==547677== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGIModifiedModels -malloc_debug -malloc_dump -memory_info
==547677== Parent PID: 531165
==547677== 
==547677== Warning: noted but unhandled ioctl 0x30000001 with no size/direction hints.
==547677==    This could cause spurious value errors to appear.
==547677==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547677== Warning: noted but unhandled ioctl 0x27 with no size/direction hints.
==547677==    This could cause spurious value errors to appear.
==547677==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547677== Warning: noted but unhandled ioctl 0x25 with no size/direction hints.
==547677==    This could cause spurious value errors to appear.
==547677==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547677== Warning: noted but unhandled ioctl 0x17 with no size/direction hints.
==547677==    This could cause spurious value errors to appear.
==547677==    See README_MISSING_SYSCALL_OR_IOCTL for guidance on writing a proper wrapper.
==547677== Warning: set address range perms: large range [0x200000000, 0x700000000) (noaccess)
==547677== Warning: set address range perms: large range [0x700000000, 0x900000000) (noaccess)
==547677== Warning: set address range perms: large range [0x1732e000, 0x3732d000) (noaccess)
==547677== 
==547677== FILE DESCRIPTORS: 14 open (3 std) at exit.
==547677== Open file descriptor 23: /dev/nvidia0
==547677==    at 0x886E7A4: open (open64.c:41)
==547677==    by 0x163CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x163CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x16466B8D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x16354026: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1635D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x163D5BA7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1645FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1621A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0xE553023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0xE553FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0x13FA746A: ???
==547677==    by 0xEBA8F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB84B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB35CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEA60EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x13F95F03: ???
==547677==    by 0xEA954CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x9F67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x9F00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x8BF7D38: PetscInitialize (pinit.c:924)
==547677==    by 0x8452153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547677==    by 0x84521A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547677==    by 0x12C2F4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547677==    by 0x126ECB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547677==    by 0x129968: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547677==    by 0x129808: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547677==    by 0x129E9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547677==    by 0x122165: main (TestGIModifiedModels.cpp:19)
==547677== 
==547677== Open file descriptor 22: /dev/nvidia0
==547677==    at 0x886E7A4: open (open64.c:41)
==547677==    by 0x163CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x163CD594: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1635407E: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1635D942: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x163D5831: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1645FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1621A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0xE553023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0xE553FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0x13FA746A: ???
==547677==    by 0xEBA8F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB84B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB35CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEA60EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x13F95F03: ???
==547677==    by 0xEA954CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x9F67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x9F00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x8BF7D38: PetscInitialize (pinit.c:924)
==547677==    by 0x8452153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547677==    by 0x84521A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547677==    by 0x12C2F4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547677==    by 0x126ECB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547677==    by 0x129968: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547677==    by 0x129808: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547677==    by 0x129E9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547677==    by 0x122165: main (TestGIModifiedModels.cpp:19)
==547677== 
==547677== Open file descriptor 21: /dev/nvidia0
==547677==    at 0x886E7A4: open (open64.c:41)
==547677==    by 0x163CB6D0: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x163CC51D: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1635DEE3: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x163D54C2: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1645FC86: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1621A722: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0xE553023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0xE553FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0x13FA746A: ???
==547677==    by 0xEBA8F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB84B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB35CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEA60EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x13F95F03: ???
==547677==    by 0xEA954CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x9F67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x9F00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x8BF7D38: PetscInitialize (pinit.c:924)
==547677==    by 0x8452153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547677==    by 0x84521A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547677==    by 0x12C2F4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547677==    by 0x126ECB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547677==    by 0x129968: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547677==    by 0x129808: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547677==    by 0x129E9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547677==    by 0x122165: main (TestGIModifiedModels.cpp:19)
==547677== 
==547677== Open file descriptor 20: /dev/nvidia-uvm
==547677==    at 0x886E7A4: open (open64.c:41)
==547677==    by 0x16236F20: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1621A705: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0xE553023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0xE553FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0x13FA746A: ???
==547677==    by 0xEBA8F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB84B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB35CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEA60EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x13F95F03: ???
==547677==    by 0xEA954CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x9F67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x9F00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x8BF7D38: PetscInitialize (pinit.c:924)
==547677==    by 0x8452153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547677==    by 0x84521A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547677==    by 0x12C2F4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547677==    by 0x126ECB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547677==    by 0x129968: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547677==    by 0x129808: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547677==    by 0x129E9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547677==    by 0x122165: main (TestGIModifiedModels.cpp:19)
==547677== 
==547677== Open file descriptor 19: /dev/nvidiactl
==547677==    at 0x886E7A4: open (open64.c:41)
==547677==    by 0x163CB296: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x163D08A5: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x1621A665: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0x161648D7: ??? (in /usr/lib/x86_64-linux-gnu/libnvidia-opencl.so.470.199.02)
==547677==    by 0xE553023: ??? (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0xE553FEA: clGetPlatformIDs (in /usr/lib/x86_64-linux-gnu/libOpenCL.so.1.0.0)
==547677==    by 0x13FA746A: ???
==547677==    by 0xEBA8F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB84B30: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==547677==    by 0xEB35CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEA60EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x13F95F03: ???
==547677==    by 0xEA954CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x9F67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x9F00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x8BF7D38: PetscInitialize (pinit.c:924)
==547677==    by 0x8452153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547677==    by 0x84521A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547677==    by 0x12C2F4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547677==    by 0x126ECB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547677==    by 0x129968: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547677==    by 0x129808: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547677==    by 0x129E9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547677==    by 0x122165: main (TestGIModifiedModels.cpp:19)
==547677== 
==547677== Open file descriptor 12:
==547677==    at 0x886F26D: pipe (pipe.c:29)
==547677==    by 0x13F9507D: ???
==547677==    by 0xEA954CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x9F67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x9F00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x8BF7D38: PetscInitialize (pinit.c:924)
==547677==    by 0x8452153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547677==    by 0x84521A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547677==    by 0x12C2F4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547677==    by 0x126ECB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547677==    by 0x129968: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547677==    by 0x129808: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547677==    by 0x129E9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547677==    by 0x122165: main (TestGIModifiedModels.cpp:19)
==547677== 
==547677== Open file descriptor 8: /dev/shm/open_mpi.0000
==547677==    at 0x8873C0C: __open_nocancel (open64_nocancel.c:39)
==547677==    by 0x87F7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40)
==547677==    by 0x8486822: ???
==547677==    by 0x848696F: ???
==547677==    by 0xEB3C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEB3C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEAF2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==547677==    by 0xEA952DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==547677==    by 0x9F67418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x9F00D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==547677==    by 0x8BF7D38: PetscInitialize (pinit.c:924)
==547677==    by 0x8452153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==547677==    by 0x84521A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==547677==    by 0x12C2F4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==547677==    by 0x126ECB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==547677==    by 0x129968: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==547677==    by 0x129808: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==547677==    by 0x129E9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==547677==    by 0x122165: main (TestGIModifiedModels.cpp:19)
==547677== 
==547677== Open file descriptor 115:
==547677==    <inherited from parent>
==547677== 
==547677== Open file descriptor 112:
==547677==    <inherited from parent>
==547677== 
==547677== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGIModifiedModels_valgrind.txt
==547677==    <inherited from parent>
==547677== 
==547677== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==547677==    <inherited from parent>
==547677== 
==547677== 
==547677== HEAP SUMMARY:
==547677==     in use at exit: 1,875,822 bytes in 11,734 blocks
==547677==   total heap usage: 1,461,736 allocs, 1,450,002 frees, 1,809,126,516 bytes allocated
==547677== 
==547677== LEAK SUMMARY:
==547677==    definitely lost: 0 bytes in 0 blocks
==547677==    indirectly lost: 0 bytes in 0 blocks
==547677==      possibly lost: 0 bytes in 0 blocks
==547677==    still reachable: 24 bytes in 2 blocks
==547677==         suppressed: 1,875,798 bytes in 11,732 blocks
==547677== Reachable blocks (those to which a pointer was found) are not shown.
==547677== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==547677== 
==547677== For lists of detected and suppressed errors, rerun with: -s
==547677== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 49 from 49)