==266985== Memcheck, a memory error detector ==266985== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==266985== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==266985== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==266985== Parent PID: 266982 ==266985== ==266985== ==266985== FILE DESCRIPTORS: 9 open (3 std) at exit. ==266985== Open file descriptor 12: ==266985== at 0x4CB222D: pipe (pipe.c:29) ==266985== by 0xAEA207D: ??? ==266985== by 0x89BB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==266985== by 0x626E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==266985== by 0x6207D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==266985== by 0x4EFED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==266985== by 0x48FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==266985== by 0x48FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==266985== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==266985== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==266985== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==266985== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==266985== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==266985== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==266985== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==266985== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==266985== by 0x110C15: main (TestCitations.cpp:18) ==266985== ==266985== Open file descriptor 8: /dev/shm/open_mpi.0000 ==266985== at 0x4CB6BCC: __open_nocancel (open64_nocancel.c:39) ==266985== by 0x4C3AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==266985== by 0x492F822: ??? ==266985== by 0x492F96F: ??? ==266985== by 0x8A606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==266985== by 0x8A60938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==266985== by 0x8A16922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==266985== by 0x89BB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==266985== by 0x626E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==266985== by 0x6207D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==266985== by 0x4EFED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==266985== by 0x48FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==266985== by 0x48FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==266985== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==266985== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==266985== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==266985== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==266985== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==266985== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==266985== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==266985== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==266985== by 0x110C15: main (TestCitations.cpp:18) ==266985== ==266985== Open file descriptor 116: ==266985== ==266985== ==266985== Open file descriptor 113: ==266985== ==266985== ==266985== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==266985== ==266985== ==266985== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==266985== ==266985== ==266985== ==266985== HEAP SUMMARY: ==266985== in use at exit: 857,491 bytes in 12,112 blocks ==266985== total heap usage: 54,342 allocs, 42,230 frees, 1,542,864,057 bytes allocated ==266985== ==266985== LEAK SUMMARY: ==266985== definitely lost: 0 bytes in 0 blocks ==266985== indirectly lost: 0 bytes in 0 blocks ==266985== possibly lost: 0 bytes in 0 blocks ==266985== still reachable: 24 bytes in 2 blocks ==266985== suppressed: 857,467 bytes in 12,110 blocks ==266985== Reachable blocks (those to which a pointer was found) are not shown. ==266985== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==266985== ==266985== For lists of detected and suppressed errors, rerun with: -s ==266985== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 20 from 20)