==268691== Memcheck, a memory error detector ==268691== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==268691== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==268691== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==268691== Parent PID: 266982 ==268691== ==268691== ==268691== FILE DESCRIPTORS: 9 open (3 std) at exit. ==268691== Open file descriptor 12: ==268691== at 0x10A4722D: pipe (pipe.c:29) ==268691== by 0x1976907D: ??? ==268691== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==268691== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268691== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268691== by 0xF21AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==268691== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==268691== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==268691== by 0x159C05: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==268691== by 0x15216D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==268691== by 0x1555B6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==268691== by 0x155456: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==268691== by 0x155AED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==268691== by 0x150595: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==268691== ==268691== Open file descriptor 8: /dev/shm/open_mpi.0000 ==268691== at 0x10A4BBCC: __open_nocancel (open64_nocancel.c:39) ==268691== by 0x109CFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==268691== by 0x104A4822: ??? ==268691== by 0x104A496F: ??? ==268691== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==268691== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==268691== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==268691== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==268691== by 0x105AD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268691== by 0x10546D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==268691== by 0xF21AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==268691== by 0xF0F12DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==268691== by 0xF0F132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==268691== by 0x159C05: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==268691== by 0x15216D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==268691== by 0x1555B6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==268691== by 0x155456: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==268691== by 0x155AED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==268691== by 0x150595: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==268691== ==268691== Open file descriptor 116: ==268691== ==268691== ==268691== Open file descriptor 113: ==268691== ==268691== ==268691== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==268691== ==268691== ==268691== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==268691== ==268691== ==268691== ==268691== HEAP SUMMARY: ==268691== in use at exit: 858,019 bytes in 12,113 blocks ==268691== total heap usage: 228,435 allocs, 216,322 frees, 1,567,999,965 bytes allocated ==268691== ==268691== LEAK SUMMARY: ==268691== definitely lost: 0 bytes in 0 blocks ==268691== indirectly lost: 0 bytes in 0 blocks ==268691== possibly lost: 0 bytes in 0 blocks ==268691== still reachable: 56 bytes in 3 blocks ==268691== suppressed: 857,963 bytes in 12,110 blocks ==268691== Reachable blocks (those to which a pointer was found) are not shown. ==268691== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==268691== ==268691== For lists of detected and suppressed errors, rerun with: -s ==268691== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)